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PyDISH No: 20705

PDB: 9wyj,
chainID: E, resSeq: 102
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.66 Å
origomeric count: 3

axial ligand #1: MET

chainID: A,
resSeq: 9,
Coordination distance[Å]: 2.422
molecule: Cytochrome c552
Organism: Aquifex aeolicus VF5

axial ligand #2: HIS

chainID: E,
resSeq: 60,
Coordination distance[Å]: 1.997
molecule: Cytochrome c552
Organism: Aquifex aeolicus VF5

List of other hemes in pdb:9wyj

ID of heme Distortion Axial ligands on heme Function & structure
9wyj-A-101
sad. +0.31
ruf. -0.20
dom. +0.05
bre. -0.21
HIS chainID: A,
resSeq: 60,
molecule: Cytochrome c552
electron transporter
oligomeric count: 3
pocket vol.: 385.0 Å3
d(Fe-oop): 0.038 Å
MET chainID: C, resSeq: 9,
molecule: Cytochrome c552
9wyj-B-102
sad. +0.37
ruf. -0.24
dom. +0.06
bre. -0.18
HIS chainID: B,
resSeq: 60,
molecule: Cytochrome c552
electron transporter
oligomeric count: 3
pocket vol.: 407.0 Å3
d(Fe-oop): 0.010 Å
MET chainID: D, resSeq: 9,
molecule: Cytochrome c552
9wyj-C-102
sad. +0.31
ruf. -0.13
dom. +0.01
bre. -0.16
HIS chainID: C,
resSeq: 60,
molecule: Cytochrome c552
electron transporter
oligomeric count: 3
pocket vol.: 394.0 Å3
d(Fe-oop): 0.031 Å
MET chainID: E, resSeq: 9,
molecule: Cytochrome c552
9wyj-D-101
sad. +0.34
ruf. -0.10
dom. +0.02
bre. -0.23
HIS chainID: D,
resSeq: 60,
molecule: Cytochrome c552
electron transporter
oligomeric count: 3
pocket vol.: 407.0 Å3
d(Fe-oop): 0.017 Å
MET chainID: F, resSeq: 9,
molecule: Cytochrome c552
9wyj-F-104
sad. +0.33
ruf. -0.22
dom. +0.04
bre. -0.15
MET chainID: B,
resSeq: 9,
molecule: Cytochrome c552
electron transporter
oligomeric count: 3
pocket vol.: 392.0 Å3
d(Fe-oop): 0.034 Å
HIS chainID: F, resSeq: 60,
molecule: Cytochrome c552