Browser

PyDISH No: 20573

PDB: 9w7d,
chainID: v, resSeq: 201
heme type: C

distortion

Protein data

function: unclassified
experiment: ELECTRON MICROSCOPY
resolution: 2.05 Å
origomeric count: 38

axial ligand #1: HIS

chainID: v,
resSeq: 41,
Coordination distance[Å]: 2.645
molecule: Photosystem II extrinsic protein V
Organism: Thermosynechococcus vestitus BP-1

axial ligand #2: HIS

chainID: v,
resSeq: 92,
Coordination distance[Å]: 2.705
molecule: same as ligand #1

List of other hemes in pdb:9w7d

ID of heme Distortion Axial ligands on heme Function & structure
9w7d-F-102
sad. +0.45
ruf. -0.38
dom. +0.36
bre. -0.01
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 38
pocket vol.: 517.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
9w7d-V-201
sad. +0.31
ruf. -0.67
dom. +0.50
bre. -0.12
HIS chainID: V,
resSeq: 41,
molecule: Photosystem II extrinsic protein V
unclassified
oligomeric count: 38
pocket vol.: 509.0 Å3
d(Fe-oop): 0.077 Å
HIS chainID: V, resSeq: 92,
molecule: Photosystem II extrinsic protein V
9w7d-f-102
sad. +0.45
ruf. -0.38
dom. +0.36
bre. -0.02
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 38
pocket vol.: 488.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta