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PyDISH No: 20504

PDB: 9wtc,
chainID: D, resSeq: 503
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å
origomeric count: 4

axial ligand #1: HIS

chainID: D,
resSeq: 62,
Coordination distance[Å]: 2.005
molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
Organism: Geobacter sulfurreducens PCA

axial ligand #2: HIS

chainID: D,
resSeq: 201,
Coordination distance[Å]: 2.002
molecule: same as ligand #1

List of other hemes in pdb:9wtc

ID of heme	Distortion	Axial ligands on heme		Function & structure
9wtc-A-501	`sad. -0.04 ruf. -0.62 dom. +0.02 bre. -0.10`	HIS	chainID: A, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 528.0 Å³ d(Fe-oop): 0.035 Å
9wtc-A-501	`sad. -0.04 ruf. -0.62 dom. +0.02 bre. -0.10`	HIS	chainID: A, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-A-502	`sad. -0.51 ruf. -0.71 dom. -0.02 bre. -0.07`	HIS	chainID: A, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 397.0 Å³ d(Fe-oop): 0.007 Å
9wtc-A-502	`sad. -0.51 ruf. -0.71 dom. -0.02 bre. -0.07`	CSD	chainID: A, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-A-503	`sad. +0.01 ruf. -0.93 dom. +0.03 bre. +0.02`	HIS	chainID: A, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 490.0 Å³ d(Fe-oop): 0.027 Å
9wtc-A-503	`sad. +0.01 ruf. -0.93 dom. +0.03 bre. +0.02`	HIS	chainID: A, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-A-504	`sad. -0.22 ruf. -0.79 dom. -0.12 bre. -0.04`	HIS	chainID: A, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 406.0 Å³ d(Fe-oop): 0.058 Å
9wtc-A-504	`sad. -0.22 ruf. -0.79 dom. -0.12 bre. -0.04`	HIS	chainID: A, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-A-505	`sad. -0.48 ruf. -0.84 dom. -0.06 bre. -0.12`	HIS	chainID: A, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 346.0 Å³ d(Fe-oop): 0.090 Å
9wtc-A-505	`sad. -0.48 ruf. -0.84 dom. -0.06 bre. -0.12`	HIS	chainID: A, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-B-501	`sad. +0.05 ruf. -0.44 dom. +0.04 bre. -0.20`	HIS	chainID: B, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 503.0 Å³ d(Fe-oop): 0.004 Å
9wtc-B-501	`sad. +0.05 ruf. -0.44 dom. +0.04 bre. -0.20`	HIS	chainID: B, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-B-502	`sad. -0.52 ruf. -0.59 dom. -0.02 bre. +0.02`	HIS	chainID: B, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 376.0 Å³ d(Fe-oop): 0.019 Å
9wtc-B-502	`sad. -0.52 ruf. -0.59 dom. -0.02 bre. +0.02`	CSD	chainID: B, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-B-503	`sad. +0.04 ruf. -0.98 dom. -0.01 bre. -0.10`	HIS	chainID: B, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 418.0 Å³ d(Fe-oop): 0.042 Å
9wtc-B-503	`sad. +0.04 ruf. -0.98 dom. -0.01 bre. -0.10`	HIS	chainID: B, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-B-504	`sad. -0.22 ruf. -0.82 dom. -0.19 bre. +0.03`	HIS	chainID: B, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 390.0 Å³ d(Fe-oop): 0.022 Å
9wtc-B-504	`sad. -0.22 ruf. -0.82 dom. -0.19 bre. +0.03`	HIS	chainID: B, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-B-505	`sad. -0.59 ruf. -0.99 dom. -0.05 bre. -0.01`	HIS	chainID: B, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 344.0 Å³ d(Fe-oop): 0.028 Å
9wtc-B-505	`sad. -0.59 ruf. -0.99 dom. -0.05 bre. -0.01`	HIS	chainID: B, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-C-502	`sad. -0.07 ruf. -0.45 dom. +0.00 bre. -0.20`	HIS	chainID: C, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 505.0 Å³ d(Fe-oop): 0.028 Å
9wtc-C-502	`sad. -0.07 ruf. -0.45 dom. +0.00 bre. -0.20`	HIS	chainID: C, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-C-503	`sad. -0.40 ruf. -0.59 dom. +0.10 bre. -0.15`	HIS	chainID: C, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 407.0 Å³ d(Fe-oop): 0.027 Å
9wtc-C-503	`sad. -0.40 ruf. -0.59 dom. +0.10 bre. -0.15`	CSD	chainID: C, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-C-504	`sad. -0.06 ruf. -1.03 dom. -0.07 bre. -0.01`	HIS	chainID: C, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 461.0 Å³ d(Fe-oop): 0.050 Å
9wtc-C-504	`sad. -0.06 ruf. -1.03 dom. -0.07 bre. -0.01`	HIS	chainID: C, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-C-505	`sad. -0.13 ruf. -0.73 dom. -0.17 bre. -0.02`	HIS	chainID: C, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 423.0 Å³ d(Fe-oop): 0.045 Å
9wtc-C-505	`sad. -0.13 ruf. -0.73 dom. -0.17 bre. -0.02`	HIS	chainID: C, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-C-506	`sad. -0.51 ruf. -0.89 dom. -0.06 bre. -0.07`	HIS	chainID: C, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 368.0 Å³ d(Fe-oop): 0.098 Å
9wtc-C-506	`sad. -0.51 ruf. -0.89 dom. -0.06 bre. -0.07`	HIS	chainID: C, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-D-504	`sad. -0.57 ruf. -0.62 dom. +0.01 bre. +0.01`	HIS	chainID: D, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 387.0 Å³ d(Fe-oop): 0.004 Å
9wtc-D-504	`sad. -0.57 ruf. -0.62 dom. +0.01 bre. +0.01`	CSD	chainID: D, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-D-505	`sad. -0.00 ruf. -0.94 dom. +0.04 bre. -0.09`	HIS	chainID: D, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 467.0 Å³ d(Fe-oop): 0.053 Å
9wtc-D-505	`sad. -0.00 ruf. -0.94 dom. +0.04 bre. -0.09`	HIS	chainID: D, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-D-506	`sad. -0.23 ruf. -0.81 dom. -0.09 bre. -0.11`	HIS	chainID: D, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 398.0 Å³ d(Fe-oop): 0.004 Å
9wtc-D-506	`sad. -0.23 ruf. -0.81 dom. -0.09 bre. -0.11`	HIS	chainID: D, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wtc-D-507	`sad. -0.59 ruf. -0.89 dom. -0.04 bre. -0.13`	HIS	chainID: D, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 315.0 Å³ d(Fe-oop): 0.059 Å
9wtc-D-507	`sad. -0.59 ruf. -0.89 dom. -0.04 bre. -0.13`	HIS	chainID: D, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)