Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 20464

PDB: 9wta,
chainID: D, resSeq: 502
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å
origomeric count: 4

axial ligand #1: HIS

chainID: D,
resSeq: 62,
Coordination distance[Å]: 2.008
molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
Organism: Geobacter sulfurreducens PCA

axial ligand #2: HIS

chainID: D,
resSeq: 201,
Coordination distance[Å]: 1.984
molecule: same as ligand #1

List of other hemes in pdb:9wta

ID of heme	Distortion	Axial ligands on heme		Function & structure
9wta-A-501	`sad. -0.09 ruf. -0.72 dom. -0.01 bre. -0.11`	HIS	chainID: A, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 545.0 Å³ d(Fe-oop): 0.015 Å
9wta-A-501	`sad. -0.09 ruf. -0.72 dom. -0.01 bre. -0.11`	HIS	chainID: A, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-A-502	`sad. -0.46 ruf. -0.69 dom. -0.04 bre. -0.16`	HIS	chainID: A, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 388.0 Å³ d(Fe-oop): 0.077 Å
9wta-A-502	`sad. -0.46 ruf. -0.69 dom. -0.04 bre. -0.16`	CYS	chainID: A, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-A-503	`sad. -0.09 ruf. -0.93 dom. +0.02 bre. +0.01`	HIS	chainID: A, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 482.0 Å³ d(Fe-oop): 0.057 Å
9wta-A-503	`sad. -0.09 ruf. -0.93 dom. +0.02 bre. +0.01`	HIS	chainID: A, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-A-504	`sad. -0.13 ruf. -0.84 dom. -0.13 bre. -0.09`	HIS	chainID: A, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 415.0 Å³ d(Fe-oop): 0.060 Å
9wta-A-504	`sad. -0.13 ruf. -0.84 dom. -0.13 bre. -0.09`	HIS	chainID: A, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-A-505	`sad. -0.47 ruf. -0.85 dom. -0.06 bre. -0.07`	HIS	chainID: A, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 334.0 Å³ d(Fe-oop): 0.093 Å
9wta-A-505	`sad. -0.47 ruf. -0.85 dom. -0.06 bre. -0.07`	HIS	chainID: A, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-B-502	`sad. -0.00 ruf. -0.58 dom. +0.04 bre. -0.19`	HIS	chainID: B, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 499.0 Å³ d(Fe-oop): 0.007 Å
9wta-B-502	`sad. -0.00 ruf. -0.58 dom. +0.04 bre. -0.19`	HIS	chainID: B, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-B-503	`sad. -0.58 ruf. -0.53 dom. +0.01 bre. +0.03`	HIS	chainID: B, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 367.0 Å³ d(Fe-oop): 0.094 Å
9wta-B-503	`sad. -0.58 ruf. -0.53 dom. +0.01 bre. +0.03`	CYS	chainID: B, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-B-504	`sad. +0.01 ruf. -0.91 dom. -0.02 bre. -0.11`	HIS	chainID: B, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 433.0 Å³ d(Fe-oop): 0.038 Å
9wta-B-504	`sad. +0.01 ruf. -0.91 dom. -0.02 bre. -0.11`	HIS	chainID: B, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-B-505	`sad. -0.16 ruf. -0.90 dom. -0.11 bre. +0.00`	HIS	chainID: B, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 421.0 Å³ d(Fe-oop): 0.003 Å
9wta-B-505	`sad. -0.16 ruf. -0.90 dom. -0.11 bre. +0.00`	HIS	chainID: B, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-B-506	`sad. -0.54 ruf. -0.91 dom. -0.02 bre. -0.05`	HIS	chainID: B, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 353.0 Å³ d(Fe-oop): 0.024 Å
9wta-B-506	`sad. -0.54 ruf. -0.91 dom. -0.02 bre. -0.05`	HIS	chainID: B, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-C-502	`sad. -0.05 ruf. -0.49 dom. +0.08 bre. -0.21`	HIS	chainID: C, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 528.0 Å³ d(Fe-oop): 0.034 Å
9wta-C-502	`sad. -0.05 ruf. -0.49 dom. +0.08 bre. -0.21`	HIS	chainID: C, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-C-503	`sad. -0.48 ruf. -0.66 dom. +0.05 bre. -0.12`	HIS	chainID: C, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 401.0 Å³ d(Fe-oop): 0.158 Å
9wta-C-503	`sad. -0.48 ruf. -0.66 dom. +0.05 bre. -0.12`	CYS	chainID: C, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-C-504	`sad. -0.01 ruf. -0.98 dom. -0.05 bre. -0.04`	HIS	chainID: C, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 469.0 Å³ d(Fe-oop): 0.102 Å
9wta-C-504	`sad. -0.01 ruf. -0.98 dom. -0.05 bre. -0.04`	HIS	chainID: C, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-C-505	`sad. -0.09 ruf. -0.73 dom. -0.11 bre. -0.08`	HIS	chainID: C, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 431.0 Å³ d(Fe-oop): 0.043 Å
9wta-C-505	`sad. -0.09 ruf. -0.73 dom. -0.11 bre. -0.08`	HIS	chainID: C, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-C-506	`sad. -0.50 ruf. -0.87 dom. -0.02 bre. -0.11`	HIS	chainID: C, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 352.0 Å³ d(Fe-oop): 0.127 Å
9wta-C-506	`sad. -0.50 ruf. -0.87 dom. -0.02 bre. -0.11`	HIS	chainID: C, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-D-503	`sad. -0.60 ruf. -0.75 dom. -0.04 bre. -0.02`	HIS	chainID: D, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 387.0 Å³ d(Fe-oop): 0.031 Å
9wta-D-503	`sad. -0.60 ruf. -0.75 dom. -0.04 bre. -0.02`	CYS	chainID: D, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-D-504	`sad. -0.00 ruf. -0.93 dom. +0.07 bre. -0.08`	HIS	chainID: D, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 443.0 Å³ d(Fe-oop): 0.027 Å
9wta-D-504	`sad. -0.00 ruf. -0.93 dom. +0.07 bre. -0.08`	HIS	chainID: D, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-D-505	`sad. -0.13 ruf. -0.80 dom. -0.12 bre. -0.10`	HIS	chainID: D, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 416.0 Å³ d(Fe-oop): 0.017 Å
9wta-D-505	`sad. -0.13 ruf. -0.80 dom. -0.12 bre. -0.10`	HIS	chainID: D, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)
9wta-D-506	`sad. -0.57 ruf. -0.86 dom. -0.00 bre. -0.12`	HIS	chainID: D, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)	electron transporter oligomeric count: 4 pocket vol.: 338.0 Å³ d(Fe-oop): 0.082 Å
9wta-D-506	`sad. -0.57 ruf. -0.86 dom. -0.00 bre. -0.12`	HIS	chainID: D, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein (MccSep)