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PyDISH No: 20433

PDB: 9wt9,
chainID: A, resSeq: 505
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å
origomeric count: 4

axial ligand #1: HIS

chainID: A,
resSeq: 263,
Coordination distance[Å]: 2.005
molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
Organism: Geobacter sulfurreducens PCA

axial ligand #2: HIS

chainID: A,
resSeq: 319,
Coordination distance[Å]: 1.983
molecule: same as ligand #1

List of other hemes in pdb:9wt9

ID of heme	Distortion	Axial ligands on heme		Function & structure
9wt9-A-501	`sad. -0.04 ruf. -0.62 dom. +0.05 bre. -0.10`	HIS	chainID: A, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 544.0 Å³ d(Fe-oop): 0.016 Å
9wt9-A-501	`sad. -0.04 ruf. -0.62 dom. +0.05 bre. -0.10`	HIS	chainID: A, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-A-502	`sad. -0.37 ruf. -0.60 dom. +0.01 bre. -0.09`	HIS	chainID: A, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 390.0 Å³ d(Fe-oop): 0.003 Å
9wt9-A-502	`sad. -0.37 ruf. -0.60 dom. +0.01 bre. -0.09`	CSD	chainID: A, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-A-503	`sad. -0.06 ruf. -0.89 dom. -0.05 bre. +0.04`	HIS	chainID: A, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 454.0 Å³ d(Fe-oop): 0.033 Å
9wt9-A-503	`sad. -0.06 ruf. -0.89 dom. -0.05 bre. +0.04`	HIS	chainID: A, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-A-504	`sad. -0.14 ruf. -0.73 dom. -0.16 bre. -0.05`	HIS	chainID: A, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 411.0 Å³ d(Fe-oop): 0.039 Å
9wt9-A-504	`sad. -0.14 ruf. -0.73 dom. -0.16 bre. -0.05`	HIS	chainID: A, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-B-501	`sad. +0.01 ruf. -0.47 dom. +0.02 bre. -0.18`	HIS	chainID: B, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 495.0 Å³ d(Fe-oop): 0.006 Å
9wt9-B-501	`sad. +0.01 ruf. -0.47 dom. +0.02 bre. -0.18`	HIS	chainID: B, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-B-502	`sad. -0.50 ruf. -0.65 dom. +0.04 bre. -0.05`	HIS	chainID: B, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 377.0 Å³ d(Fe-oop): 0.009 Å
9wt9-B-502	`sad. -0.50 ruf. -0.65 dom. +0.04 bre. -0.05`	CSD	chainID: B, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-B-503	`sad. -0.00 ruf. -1.01 dom. -0.05 bre. -0.12`	HIS	chainID: B, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 442.0 Å³ d(Fe-oop): 0.028 Å
9wt9-B-503	`sad. -0.00 ruf. -1.01 dom. -0.05 bre. -0.12`	HIS	chainID: B, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-B-504	`sad. -0.22 ruf. -0.80 dom. -0.12 bre. -0.15`	HIS	chainID: B, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 411.0 Å³ d(Fe-oop): 0.030 Å
9wt9-B-504	`sad. -0.22 ruf. -0.80 dom. -0.12 bre. -0.15`	HIS	chainID: B, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-B-505	`sad. -0.57 ruf. -0.93 dom. -0.02 bre. -0.08`	HIS	chainID: B, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 364.0 Å³ d(Fe-oop): 0.082 Å
9wt9-B-505	`sad. -0.57 ruf. -0.93 dom. -0.02 bre. -0.08`	HIS	chainID: B, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-C-502	`sad. -0.03 ruf. -0.46 dom. +0.00 bre. -0.20`	HIS	chainID: C, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 520.0 Å³ d(Fe-oop): 0.022 Å
9wt9-C-502	`sad. -0.03 ruf. -0.46 dom. +0.00 bre. -0.20`	HIS	chainID: C, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-C-503	`sad. -0.41 ruf. -0.58 dom. +0.03 bre. -0.13`	HIS	chainID: C, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 411.0 Å³ d(Fe-oop): 0.051 Å
9wt9-C-503	`sad. -0.41 ruf. -0.58 dom. +0.03 bre. -0.13`	CSD	chainID: C, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-C-504	`sad. -0.10 ruf. -0.86 dom. -0.07 bre. -0.06`	HIS	chainID: C, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 467.0 Å³ d(Fe-oop): 0.003 Å
9wt9-C-504	`sad. -0.10 ruf. -0.86 dom. -0.07 bre. -0.06`	HIS	chainID: C, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-C-505	`sad. -0.13 ruf. -0.85 dom. -0.16 bre. -0.13`	HIS	chainID: C, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 413.0 Å³ d(Fe-oop): 0.043 Å
9wt9-C-505	`sad. -0.13 ruf. -0.85 dom. -0.16 bre. -0.13`	HIS	chainID: C, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-C-506	`sad. -0.58 ruf. -0.96 dom. -0.09 bre. -0.06`	HIS	chainID: C, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 357.0 Å³ d(Fe-oop): 0.038 Å
9wt9-C-506	`sad. -0.58 ruf. -0.96 dom. -0.09 bre. -0.06`	HIS	chainID: C, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-D-503	`sad. -0.01 ruf. -0.56 dom. -0.01 bre. -0.19`	HIS	chainID: D, resSeq: 62, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 469.0 Å³ d(Fe-oop): 0.029 Å
9wt9-D-503	`sad. -0.01 ruf. -0.56 dom. -0.01 bre. -0.19`	HIS	chainID: D, resSeq: 201, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-D-504	`sad. -0.44 ruf. -0.65 dom. +0.01 bre. -0.06`	HIS	chainID: D, resSeq: 122, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 375.0 Å³ d(Fe-oop): 0.028 Å
9wt9-D-504	`sad. -0.44 ruf. -0.65 dom. +0.01 bre. -0.06`	CSD	chainID: D, resSeq: 239, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-D-505	`sad. +0.01 ruf. -0.95 dom. -0.02 bre. -0.08`	HIS	chainID: D, resSeq: 174, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 441.0 Å³ d(Fe-oop): 0.013 Å
9wt9-D-505	`sad. +0.01 ruf. -0.95 dom. -0.02 bre. -0.08`	HIS	chainID: D, resSeq: 271, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-D-506	`sad. -0.23 ruf. -0.83 dom. -0.11 bre. -0.10`	HIS	chainID: D, resSeq: 74, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 395.0 Å³ d(Fe-oop): 0.020 Å
9wt9-D-506	`sad. -0.23 ruf. -0.83 dom. -0.11 bre. -0.10`	HIS	chainID: D, resSeq: 225, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)
9wt9-D-507	`sad. -0.58 ruf. -0.93 dom. -0.06 bre. -0.11`	HIS	chainID: D, resSeq: 263, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)	electron transporter oligomeric count: 4 pocket vol.: 343.0 Å³ d(Fe-oop): 0.038 Å
9wt9-D-507	`sad. -0.58 ruf. -0.93 dom. -0.06 bre. -0.11`	HIS	chainID: D, resSeq: 319, molecule: Cytochrome c,Multiheme cytochrome c selenoprotein mutant (MccSep U325A)