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PyDISH No: 20340

PDB: 9w2x,
chainID: P, resSeq: 402
heme type: B

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.2 Å
origomeric count: 22

axial ligand #1: HIS

chainID: P,
resSeq: 83,
Coordination distance[Å]: 2.09
molecule: Cytochrome b
Organism: Bos taurus

axial ligand #2: HIS

chainID: P,
resSeq: 182,
Coordination distance[Å]: 2.085
molecule: same as ligand #1

List of other hemes in pdb:9w2x

ID of heme Distortion Axial ligands on heme Function & structure
9w2x-C-401
sad. -0.62
ruf. -0.46
dom. +0.18
bre. -0.13
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 22
pocket vol.: 488.0 Å3
d(Fe-oop): 0.023 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
9w2x-C-402
sad. +0.02
ruf. -0.09
dom. -0.02
bre. -0.17
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 22
pocket vol.: 494.0 Å3
d(Fe-oop): 0.040 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
9w2x-D-1001
sad. +0.15
ruf. -0.39
dom. -0.31
bre. -0.19
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 504.0 Å3
d(Fe-oop): 0.243 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
9w2x-P-401
sad. -0.52
ruf. -0.38
dom. +0.22
bre. -0.13
HIS chainID: P,
resSeq: 97,
molecule: Cytochrome b
translocase
oligomeric count: 22
pocket vol.: 477.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: P, resSeq: 196,
molecule: Cytochrome b
9w2x-Q-1001
sad. +0.13
ruf. -0.41
dom. -0.40
bre. -0.18
HIS chainID: Q,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 499.0 Å3
d(Fe-oop): 0.223 Å
MET chainID: Q, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial