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PyDISH No: 20332

PDB: 9vtf,
chainID: C, resSeq: 601
heme type: B

distortion

Protein data

function: lyase
experiment: X-RAY DIFFRACTION
resolution: 3.03 Å
origomeric count: 4

axial ligand #1: CYS

chainID: C,
resSeq: 52,
Coordination distance[Å]: 2.516
molecule: Cystathionine beta-synthase
EC number: 4.2.1.22
Organism: Homo sapiens

axial ligand #2: HIS

chainID: C,
resSeq: 65,
Coordination distance[Å]: 2.21
molecule: same as ligand #1

List of other hemes in pdb:9vtf

ID of heme Distortion Axial ligands on heme Function & structure
9vtf-A-601
sad. -0.34
ruf. -0.59
dom. -0.12
bre. -0.20
CYS chainID: A,
resSeq: 52,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 4
pocket vol.: 454.0 Å3
d(Fe-oop): 0.373 Å
HIS chainID: A, resSeq: 65,
molecule: Cystathionine beta-synthase
9vtf-B-601
sad. -0.62
ruf. -0.94
dom. -0.04
bre. -0.15
CYS chainID: B,
resSeq: 52,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 4
pocket vol.: 559.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: B, resSeq: 65,
molecule: Cystathionine beta-synthase
9vtf-D-601
sad. -0.54
ruf. -0.86
dom. -0.14
bre. -0.24
CYS chainID: D,
resSeq: 52,
molecule: Cystathionine beta-synthase
lyase
oligomeric count: 4
pocket vol.: 502.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: D, resSeq: 65,
molecule: Cystathionine beta-synthase