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PyDISH No: 20261

PDB: 9sml,
chainID: F, resSeq: 601
heme type: B

distortion

Protein data

function: lyase
experiment: ELECTRON MICROSCOPY
resolution: 2.78 Å
origomeric count: 6

axial ligand #1: CYS

chainID: F,
resSeq: 52,
Coordination distance[Å]: 2.302
molecule: Cystathionine beta-synthase
EC number: 4.2.1.22
Organism: Homo sapiens

axial ligand #2: HIS

chainID: F,
resSeq: 65,
Coordination distance[Å]: 2.168
molecule: same as ligand #1

List of other hemes in pdb:9sml

ID of heme Distortion Axial ligands on heme Function & structure
9sml-A-601
 sad. -0.72
ruf. -0.64
dom. +0.06
bre. -0.13
 CYS chainID: A,
resSeq: 52,
molecule: Cystathionine beta-synthase		 lyase
oligomeric count: 6
pocket vol.: 489.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: A, resSeq: 65,
molecule: Cystathionine beta-synthase
9sml-B-601
 sad. -0.72
ruf. -0.64
dom. +0.06
bre. -0.13
 CYS chainID: B,
resSeq: 52,
molecule: Cystathionine beta-synthase		 lyase
oligomeric count: 6
pocket vol.: 500.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: B, resSeq: 65,
molecule: Cystathionine beta-synthase
9sml-C-601
 sad. -0.72
ruf. -0.64
dom. +0.06
bre. -0.13
 CYS chainID: C,
resSeq: 52,
molecule: Cystathionine beta-synthase		 lyase
oligomeric count: 6
pocket vol.: 488.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: C, resSeq: 65,
molecule: Cystathionine beta-synthase
9sml-D-601
 sad. -0.72
ruf. -0.64
dom. +0.06
bre. -0.13
 CYS chainID: D,
resSeq: 52,
molecule: Cystathionine beta-synthase		 lyase
oligomeric count: 6
pocket vol.: 494.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: D, resSeq: 65,
molecule: Cystathionine beta-synthase
9sml-E-601
 sad. -0.72
ruf. -0.64
dom. +0.06
bre. -0.13
 CYS chainID: E,
resSeq: 52,
molecule: Cystathionine beta-synthase		 lyase
oligomeric count: 6
pocket vol.: 495.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: E, resSeq: 65,
molecule: Cystathionine beta-synthase