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PyDISH No: 20195

PDB: 9s39,
chainID: C, resSeq: 403
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.3 Å
origomeric count: 5

axial ligand #1: MET

chainID: C,
resSeq: 233,
Coordination distance[Å]: 2.234
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: C,
resSeq: 248,
Coordination distance[Å]: 2.015
molecule: same as ligand #1

List of other hemes in pdb:9s39

ID of heme Distortion Axial ligands on heme Function & structure
9s39-C-401
sad. +0.52
ruf. -0.58
dom. +0.26
bre. -0.42
MET chainID: C,
resSeq: 74,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 5
pocket vol.: 405.0 Å3
d(Fe-oop): 0.064 Å
HIS chainID: C, resSeq: 91,
molecule: Photosynthetic reaction center cytochrome c subunit
9s39-C-402
sad. +0.35
ruf. -0.58
dom. +0.27
bre. -0.44
MET chainID: C,
resSeq: 110,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 5
pocket vol.: 348.0 Å3
d(Fe-oop): 0.082 Å
HIS chainID: C, resSeq: 136,
molecule: Photosynthetic reaction center cytochrome c subunit
9s39-C-404
sad. +0.22
ruf. -0.30
dom. +0.30
bre. -0.33
HIS chainID: C,
resSeq: 124,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 5
pocket vol.: 369.0 Å3
d(Fe-oop): 0.087 Å
HIS chainID: C, resSeq: 309,
molecule: Photosynthetic reaction center cytochrome c subunit