Browser

PyDISH No: 20155

PDB: 9sfv,
chainID: A, resSeq: 601
heme type: B

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.61 Å
origomeric count: 8

axial ligand #1: HIS

chainID: A,
resSeq: 186,
Coordination distance[Å]: 1.966
molecule: Cytochrome bd-I ubiquinol oxidase subunit 1
EC number: 7.1.1.7
Organism: Escherichia coli K-12

axial ligand #2: MET

chainID: A,
resSeq: 393,
Coordination distance[Å]: 2.8
molecule: same as ligand #1

List of other hemes in pdb:9sfv

ID of heme Distortion Axial ligands on heme Function & structure
9sfv-a-601
sad. -0.58
ruf. +0.60
dom. -0.01
bre. -0.12
HIS chainID: a,
resSeq: 186,
molecule: Cytochrome bd-I ubiquinol oxidase subunit 1
translocase
oligomeric count: 8
pocket vol.: 477.0 Å3
d(Fe-oop): 0.131 Å
MET chainID: a, resSeq: 393,
molecule: Cytochrome bd-I ubiquinol oxidase subunit 1
9sfv-a-603
sad. +0.96
ruf. +0.13
dom. -0.48
bre. -0.05
GLU chainID: a,
resSeq: 445,
molecule: Cytochrome bd-I ubiquinol oxidase subunit 1
translocase
oligomeric count: 8
pocket vol.: 447.0 Å3
d(Fe-oop): 0.097 Å
Not assigned.
9sfv-A-603
sad. +1.03
ruf. +0.20
dom. -0.41
bre. -0.03
GLU chainID: A,
resSeq: 445,
molecule: Cytochrome bd-I ubiquinol oxidase subunit 1
translocase
oligomeric count: 8
pocket vol.: 428.0 Å3
d(Fe-oop): 0.024 Å
Not assigned.