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PyDISH No: 20135

PDB: 9w2x,
chainID: N, resSeq: 402
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.2 Å
origomeric count: 22

axial ligand #1: HIS

chainID: N,
resSeq: 83,
Coordination distance[Å]: 2.711
molecule: Cytochrome b
Organism: Bos taurus

axial ligand #2: HIS

chainID: N,
resSeq: 182,
Coordination distance[Å]: 2.022
molecule: same as ligand #1

List of other hemes in pdb:9w2x

ID of heme Distortion Axial ligands on heme Function & structure
9w2x-C-401
sad. -0.57
ruf. -0.42
dom. +0.00
bre. -0.12
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 511.0 Å3
d(Fe-oop): 0.210 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
9w2x-C-402
sad. -0.09
ruf. -0.16
dom. -0.18
bre. -0.15
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 528.0 Å3
d(Fe-oop): 0.292 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
9w2x-D-301
sad. -0.17
ruf. -0.61
dom. -0.02
bre. -0.09
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 481.0 Å3
d(Fe-oop): 0.209 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
9w2x-N-401
sad. -0.55
ruf. -0.43
dom. +0.25
bre. -0.12
HIS chainID: N,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 510.0 Å3
d(Fe-oop): 0.168 Å
HIS chainID: N, resSeq: 196,
molecule: Cytochrome b
9w2x-O-301
sad. -0.13
ruf. -0.69
dom. -0.06
bre. -0.08
HIS chainID: O,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 494.0 Å3
d(Fe-oop): 0.177 Å
MET chainID: O, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial