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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 2.5 Å
origomeric count: 28
axial ligand #1: HIS
chainID: C,resSeq: 192,
Coordination distance[Å]: 2.18
molecule: Cytochrome bc1 complex cytochrome c subunit
EC number: 7.1.1.8
Organism: Mycolicibacterium smegmatis
axial ligand #2: MET
chainID: C,resSeq: 229,
Coordination distance[Å]: 2.687
molecule: same as ligand #1
List of other hemes in pdb:9qef
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
9qef-O-301 |
sad. +0.02 ruf. -0.73 dom. +0.00 bre. -0.04 |
HIS | chainID: O, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 383.0 Å3 d(Fe-oop): 0.015 Å |
| MET | chainID: O, resSeq: 122, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
9qef-O-302 |
sad. +0.25 ruf. -0.90 dom. +0.05 bre. +0.04 |
HIS | chainID: O, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 336.0 Å3 d(Fe-oop): 0.012 Å |
| MET | chainID: O, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
9qef-N-601 |
sad. -0.58 ruf. +0.06 dom. -0.12 bre. -0.12 |
HIS | chainID: N, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 387.0 Å3 d(Fe-oop): 0.249 Å |
| HIS | chainID: N, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
9qef-N-606 |
sad. -1.22 ruf. -0.58 dom. -0.04 bre. -0.01 |
HIS | chainID: N, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 397.0 Å3 d(Fe-oop): 0.069 Å |
| HIS | chainID: N, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
9qef-R-602 |
sad. -0.72 ruf. -1.05 dom. +0.34 bre. -0.37 |
HIS | chainID: R, resSeq: 397, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 28 pocket vol.: 746.0 Å3 d(Fe-oop): 0.146 Å |
| Not assigned. | ||||
9qef-R-603 |
sad. -0.63 ruf. +0.59 dom. +0.17 bre. -0.29 |
HIS | chainID: R, resSeq: 86, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 28 pocket vol.: 676.0 Å3 d(Fe-oop): 0.141 Å |
| HIS | chainID: R, resSeq: 399, molecule: Cytochrome c oxidase subunit 1 |
|||
9qef-C-301 |
sad. +0.02 ruf. -0.73 dom. +0.00 bre. -0.04 |
HIS | chainID: C, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 405.0 Å3 d(Fe-oop): 0.015 Å |
| MET | chainID: C, resSeq: 122, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
9qef-H-1002 |
sad. -0.46 ruf. -0.08 dom. -0.17 bre. -0.14 |
HIS | chainID: H, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 382.0 Å3 d(Fe-oop): 0.143 Å |
| HIS | chainID: H, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
9qef-H-1007 |
sad. -0.74 ruf. -0.65 dom. +0.34 bre. +0.16 |
HIS | chainID: H, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 375.0 Å3 d(Fe-oop): 0.063 Å |
| HIS | chainID: H, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
9qef-L-602 |
sad. -0.66 ruf. -0.79 dom. +0.29 bre. -0.41 |
HIS | chainID: L, resSeq: 397, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 28 pocket vol.: 775.0 Å3 d(Fe-oop): 0.164 Å |
| Not assigned. | ||||
9qef-L-603 |
sad. -0.74 ruf. +1.64 dom. +0.54 bre. -0.19 |
HIS | chainID: L, resSeq: 86, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 28 pocket vol.: 665.0 Å3 d(Fe-oop): 0.068 Å |
| HIS | chainID: L, resSeq: 399, molecule: Cytochrome c oxidase subunit 1 |
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