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PyDISH No: 19508

PDB: 9lb1,
chainID: I, resSeq: 302
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.9 Å
origomeric count: 9

axial ligand #1: HIS

chainID: I,
resSeq: 32,
Coordination distance[Å]: 2.323
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
Organism: Chloroflexus aurantiacus J-10-fl

axial ligand #2: HIS

chainID: I,
resSeq: 135,
Coordination distance[Å]: 2.598
molecule: same as ligand #1

List of other hemes in pdb:9lb1

ID of heme Distortion Axial ligands on heme Function & structure
9lb1-C-301
sad. -0.63
ruf. -0.14
dom. +0.24
bre. +0.07
HIS chainID: C,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 408.0 Å3
d(Fe-oop): 0.102 Å
HIS chainID: C, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb1-C-302
sad. -0.09
ruf. -0.52
dom. -0.02
bre. +0.04
HIS chainID: C,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 586.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: C, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb1-F-301
sad. -0.56
ruf. -0.10
dom. +0.17
bre. +0.05
HIS chainID: F,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 413.0 Å3
d(Fe-oop): 0.107 Å
HIS chainID: F, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb1-F-302
sad. -0.01
ruf. -0.14
dom. -0.13
bre. -0.01
HIS chainID: F,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 581.0 Å3
d(Fe-oop): 0.051 Å
HIS chainID: F, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb1-I-301
sad. -0.68
ruf. -0.31
dom. +0.30
bre. +0.17
HIS chainID: I,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 397.0 Å3
d(Fe-oop): 0.088 Å
HIS chainID: I, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family