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PyDISH No: 19500

PDB: 9lb0,
chainID: F, resSeq: 302
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.74 Å
origomeric count: 9

axial ligand #1: HIS

chainID: F,
resSeq: 32,
Coordination distance[Å]: 2.393
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
Organism: Chloroflexus aurantiacus J-10-fl

axial ligand #2: HIS

chainID: F,
resSeq: 135,
Coordination distance[Å]: 2.31
molecule: same as ligand #1

List of other hemes in pdb:9lb0

ID of heme Distortion Axial ligands on heme Function & structure
9lb0-C-301
sad. -0.54
ruf. -0.30
dom. +0.23
bre. +0.08
HIS chainID: C,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 416.0 Å3
d(Fe-oop): 0.084 Å
HIS chainID: C, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb0-C-302
sad. +0.11
ruf. -0.93
dom. -0.21
bre. +0.17
HIS chainID: C,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 535.0 Å3
d(Fe-oop): 0.032 Å
HIS chainID: C, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb0-F-301
sad. -0.52
ruf. -0.18
dom. +0.21
bre. +0.06
HIS chainID: F,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 402.0 Å3
d(Fe-oop): 0.083 Å
HIS chainID: F, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb0-I-301
sad. -0.59
ruf. -0.06
dom. +0.36
bre. +0.07
HIS chainID: I,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 388.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: I, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lb0-I-302
sad. +0.12
ruf. +0.35
dom. -0.02
bre. +0.02
HIS chainID: I,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 557.0 Å3
d(Fe-oop): 0.024 Å
HIS chainID: I, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family