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PyDISH No: 19485

PDB: 9lay,
chainID: C, resSeq: 301
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.62 Å
origomeric count: 9

axial ligand #1: HIS

chainID: C,
resSeq: 81,
Coordination distance[Å]: 2.362
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
Organism: Chloroflexus aurantiacus J-10-fl

axial ligand #2: HIS

chainID: C,
resSeq: 188,
Coordination distance[Å]: 2.302
molecule: same as ligand #1

List of other hemes in pdb:9lay

ID of heme Distortion Axial ligands on heme Function & structure
9lay-C-302
sad. -0.16
ruf. -0.46
dom. +0.07
bre. +0.03
HIS chainID: C,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 506.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: C, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lay-F-302
sad. -0.59
ruf. -0.23
dom. +0.21
bre. +0.06
HIS chainID: F,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 401.0 Å3
d(Fe-oop): 0.102 Å
HIS chainID: F, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lay-F-303
sad. -0.18
ruf. -0.53
dom. +0.11
bre. +0.03
HIS chainID: F,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 489.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: F, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lay-I-302
sad. -0.59
ruf. -0.49
dom. +0.19
bre. +0.06
HIS chainID: I,
resSeq: 81,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 401.0 Å3
d(Fe-oop): 0.103 Å
HIS chainID: I, resSeq: 188,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
9lay-I-303
sad. -0.16
ruf. -0.48
dom. +0.06
bre. +0.03
HIS chainID: I,
resSeq: 32,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family
electron transporter
oligomeric count: 9
pocket vol.: 510.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: I, resSeq: 135,
molecule: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family