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PyDISH No: 19440

PDB: 9ltv,
chainID: C, resSeq: 401
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.75 Å
origomeric count: 33

axial ligand #1: MET

chainID: C,
resSeq: 144,
Coordination distance[Å]: 3.051
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Dinoroseobacter shibae DFL 12 = DSM 16493

axial ligand #2: HIS

chainID: C,
resSeq: 173,
Coordination distance[Å]: 2.026
molecule: same as ligand #1

List of other hemes in pdb:9ltv

ID of heme Distortion Axial ligands on heme Function & structure
9ltv-C-402
sad. +0.32
ruf. -0.81
dom. +0.50
bre. +0.05
MET chainID: C,
resSeq: 255,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 33
pocket vol.: 436.0 Å3
d(Fe-oop): 0.275 Å
HIS chainID: C, resSeq: 270,
molecule: Photosynthetic reaction center cytochrome c subunit
9ltv-C-403
sad. +0.02
ruf. -0.78
dom. +0.53
bre. +0.09
HIS chainID: C,
resSeq: 158,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 33
pocket vol.: 431.0 Å3
d(Fe-oop): 0.249 Å
HIS chainID: C, resSeq: 332,
molecule: Photosynthetic reaction center cytochrome c subunit