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PyDISH No: 19176

PDB: 9i4x,
chainID: a, resSeq: 406
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.79 Å
origomeric count: 24

axial ligand #1: HIS

chainID: a,
resSeq: 96,
Coordination distance[Å]: 2.116
molecule: Cytochrome b
Organism: Toxoplasma gondii GT1

axial ligand #2: HIS

chainID: a,
resSeq: 192,
Coordination distance[Å]: 2.844
molecule: same as ligand #1

List of other hemes in pdb:9i4x

ID of heme Distortion Axial ligands on heme Function & structure
9i4x-A-405
sad. +0.09
ruf. -0.45
dom. +0.19
bre. -0.12
HIS chainID: A,
resSeq: 82,
molecule: Cytochrome b
electron transporter
oligomeric count: 24
pocket vol.: 525.0 Å3
d(Fe-oop): 0.203 Å
HIS chainID: A, resSeq: 178,
molecule: Cytochrome b
9i4x-A-406
sad. -0.48
ruf. -0.61
dom. +0.18
bre. -0.07
HIS chainID: A,
resSeq: 96,
molecule: Cytochrome b
electron transporter
oligomeric count: 24
pocket vol.: 474.0 Å3
d(Fe-oop): 0.033 Å
HIS chainID: A, resSeq: 192,
molecule: Cytochrome b
9i4x-B-402
sad. +0.11
ruf. -0.38
dom. +0.24
bre. -0.21
HIS chainID: B,
resSeq: 196,
molecule: Cytochrome c1, heme protein
electron transporter
oligomeric count: 24
pocket vol.: 481.0 Å3
d(Fe-oop): 0.194 Å
MET chainID: B, resSeq: 315,
molecule: Cytochrome c1, heme protein
9i4x-a-405
sad. +0.09
ruf. -0.45
dom. +0.19
bre. -0.12
HIS chainID: a,
resSeq: 82,
molecule: Cytochrome b
electron transporter
oligomeric count: 24
pocket vol.: 520.0 Å3
d(Fe-oop): 0.203 Å
HIS chainID: a, resSeq: 178,
molecule: Cytochrome b
9i4x-b-402
sad. +0.11
ruf. -0.38
dom. +0.24
bre. -0.21
HIS chainID: b,
resSeq: 196,
molecule: Cytochrome c1, heme protein
electron transporter
oligomeric count: 24
pocket vol.: 507.0 Å3
d(Fe-oop): 0.194 Å
MET chainID: b, resSeq: 315,
molecule: Cytochrome c1, heme protein