Browser

PyDISH No: 19066

PDB: 9h8t,
chainID: J, resSeq: 406
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.67 Å
origomeric count: 21

axial ligand #1: HIS

chainID: J,
resSeq: 97,
Coordination distance[Å]: 2.651
molecule: Cytochrome b
Organism: Chlorocebus sabaeus

axial ligand #2: HIS

chainID: J,
resSeq: 196,
Coordination distance[Å]: 2.27
molecule: same as ligand #1

List of other hemes in pdb:9h8t

ID of heme Distortion Axial ligands on heme Function & structure
9h8t-D-401
sad. +0.13
ruf. -0.15
dom. +0.15
bre. -0.25
HIS chainID: D,
resSeq: 125,
molecule: Cytochrome c1
electron transporter
oligomeric count: 21
pocket vol.: 506.0 Å3
d(Fe-oop): 0.194 Å
MET chainID: D, resSeq: 244,
molecule: Cytochrome c1
9h8t-J-405
sad. -0.02
ruf. -0.30
dom. -0.23
bre. -0.15
HIS chainID: J,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 21
pocket vol.: 512.0 Å3
d(Fe-oop): 0.285 Å
HIS chainID: J, resSeq: 182,
molecule: Cytochrome b
9h8t-d-401
sad. +0.13
ruf. -0.15
dom. +0.15
bre. -0.25
HIS chainID: d,
resSeq: 125,
molecule: Cytochrome c1
electron transporter
oligomeric count: 21
pocket vol.: 501.0 Å3
d(Fe-oop): 0.194 Å
MET chainID: d, resSeq: 244,
molecule: Cytochrome c1
9h8t-j-405
sad. -0.02
ruf. -0.30
dom. -0.23
bre. -0.15
HIS chainID: j,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 21
pocket vol.: 504.0 Å3
d(Fe-oop): 0.285 Å
HIS chainID: j, resSeq: 182,
molecule: Cytochrome b
9h8t-j-406
sad. -0.72
ruf. -0.47
dom. +0.39
bre. -0.08
HIS chainID: j,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 21
pocket vol.: 465.0 Å3
d(Fe-oop): 0.255 Å
HIS chainID: j, resSeq: 196,
molecule: Cytochrome b