Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 19013

PDB: 9fq7,
chainID: 4q, resSeq: 907
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.5 Å
origomeric count: 100

axial ligand #1: HIS

chainID: 4q,
resSeq: 464,
Coordination distance[Å]: 2.447
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Perkinsus marinus

axial ligand #2: HIS

chainID: 4q,
resSeq: 772,
Coordination distance[Å]: 2.297
molecule: same as ligand #1

List of other hemes in pdb:9fq7

ID of heme	Distortion	Axial ligands on heme		Function & structure
9fq7-3C-302	`sad. -0.22 ruf. -0.40 dom. -0.13 bre. -0.04`	HIS	chainID: 3C, resSeq: 77, molecule: CytC1	unclassified oligomeric count: 100 pocket vol.: 410.0 Å³ d(Fe-oop): 0.036 Å
9fq7-3C-302	`sad. -0.22 ruf. -0.40 dom. -0.13 bre. -0.04`	MET	chainID: 3C, resSeq: 196, molecule: CytC1
9fq7-3G-405	`sad. -0.02 ruf. +0.08 dom. +0.10 bre. -0.12`	HIS	chainID: 3G, resSeq: 71, molecule: Cytochrome b	electron transporter oligomeric count: 100 pocket vol.: 422.0 Å³ d(Fe-oop): 0.060 Å
9fq7-3G-405	`sad. -0.02 ruf. +0.08 dom. +0.10 bre. -0.12`	HIS	chainID: 3G, resSeq: 167, molecule: Cytochrome b
9fq7-3G-406	`sad. -0.48 ruf. -0.55 dom. -0.07 bre. -0.10`	HIS	chainID: 3G, resSeq: 85, molecule: Cytochrome b	electron transporter oligomeric count: 100 pocket vol.: 390.0 Å³ d(Fe-oop): 0.033 Å
9fq7-3G-406	`sad. -0.48 ruf. -0.55 dom. -0.07 bre. -0.10`	HIS	chainID: 3G, resSeq: 181, molecule: Cytochrome b
9fq7-3c-302	`sad. -0.10 ruf. -0.24 dom. -0.31 bre. +0.02`	HIS	chainID: 3c, resSeq: 77, molecule: CytC1	unclassified oligomeric count: 100 pocket vol.: 410.0 Å³ d(Fe-oop): 0.108 Å
9fq7-3c-302	`sad. -0.10 ruf. -0.24 dom. -0.31 bre. +0.02`	MET	chainID: 3c, resSeq: 196, molecule: CytC1
9fq7-3g-407	`sad. -0.01 ruf. +0.07 dom. +0.07 bre. -0.11`	HIS	chainID: 3g, resSeq: 71, molecule: Cytochrome b	electron transporter oligomeric count: 100 pocket vol.: 403.0 Å³ d(Fe-oop): 0.048 Å
9fq7-3g-407	`sad. -0.01 ruf. +0.07 dom. +0.07 bre. -0.11`	HIS	chainID: 3g, resSeq: 167, molecule: Cytochrome b
9fq7-3g-408	`sad. -0.48 ruf. -0.56 dom. -0.06 bre. -0.10`	HIS	chainID: 3g, resSeq: 85, molecule: Cytochrome b	electron transporter oligomeric count: 100 pocket vol.: 386.0 Å³ d(Fe-oop): 0.031 Å
9fq7-3g-408	`sad. -0.48 ruf. -0.56 dom. -0.06 bre. -0.10`	HIS	chainID: 3g, resSeq: 181, molecule: Cytochrome b
9fq7-4Q-907	`sad. +0.01 ruf. +0.01 dom. -0.01 bre. +0.07`	HIS	chainID: 4Q, resSeq: 464, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 100 pocket vol.: 687.0 Å³ d(Fe-oop): 0.008 Å
9fq7-4Q-907	`sad. +0.01 ruf. +0.01 dom. -0.01 bre. +0.07`	HIS	chainID: 4Q, resSeq: 772, molecule: Cytochrome c oxidase subunit 1
9fq7-4Q-908	`sad. +0.01 ruf. +0.00 dom. -0.01 bre. +0.01`	HIS	chainID: 4Q, resSeq: 770, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 100 pocket vol.: 697.0 Å³ d(Fe-oop): 0.003 Å
9fq7-4Q-908	`sad. +0.01 ruf. +0.00 dom. -0.01 bre. +0.01`	PER	chainID: 4Q, resSeq: 909, molecule: PEROXIDE ION
9fq7-4q-908	`sad. +0.01 ruf. +0.00 dom. -0.01 bre. +0.02`	HIS	chainID: 4q, resSeq: 770, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 100 pocket vol.: 695.0 Å³ d(Fe-oop): 0.002 Å
9fq7-4q-908	`sad. +0.01 ruf. +0.00 dom. -0.01 bre. +0.02`	PER	chainID: 4q, resSeq: 909, molecule: PEROXIDE ION