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PyDISH No: 18996

PDB: 9km0,
chainID: C, resSeq: 402
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.78 Å
origomeric count: 39

axial ligand #1: MET

chainID: C,
resSeq: 255,
Coordination distance[Å]: 2.776
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Dinoroseobacter shibae DFL 12 = DSM 16493

axial ligand #2: HIS

chainID: C,
resSeq: 270,
Coordination distance[Å]: 1.92
molecule: same as ligand #1

List of other hemes in pdb:9km0

ID of heme Distortion Axial ligands on heme Function & structure
9km0-C-401
sad. +0.13
ruf. +0.16
dom. -0.26
bre. -0.03
MET chainID: C,
resSeq: 144,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 39
pocket vol.: 350.0 Å3
d(Fe-oop): 0.046 Å
HIS chainID: C, resSeq: 173,
molecule: Photosynthetic reaction center cytochrome c subunit
9km0-C-403
sad. -0.15
ruf. -0.24
dom. -0.19
bre. -0.02
HIS chainID: C,
resSeq: 158,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 39
pocket vol.: 335.0 Å3
d(Fe-oop): 0.065 Å
HIS chainID: C, resSeq: 332,
molecule: Photosynthetic reaction center cytochrome c subunit