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PyDISH No: 18953

PDB: 9fbn,
chainID: D, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å
origomeric count: 6

axial ligand #1: HIS

chainID: D,
resSeq: 225,
Coordination distance[Å]: 2.077
molecule: Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup
Organism: Streptomyces lividans 1326

axial ligand #2: O

chainID: D,
resSeq: 402,
Coordination distance[Å]: 1.944
molecule: OXYGEN ATOM

List of other hemes in pdb:9fbn

ID of heme Distortion Axial ligands on heme Function & structure
9fbn-A-401
sad. +0.24
ruf. +0.37
dom. +0.04
bre. +0.11
HIS chainID: A,
resSeq: 225,
molecule: Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup
oxidoreductase
oligomeric count: 6
pocket vol.: 433.0 Å3
d(Fe-oop): 0.037 Å
O chainID: A, resSeq: 403,
molecule: OXYGEN ATOM
9fbn-B-401
sad. +0.24
ruf. +0.29
dom. -0.01
bre. -0.04
HIS chainID: B,
resSeq: 225,
molecule: Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup
oxidoreductase
oligomeric count: 6
pocket vol.: 426.0 Å3
d(Fe-oop): 0.071 Å
O chainID: B, resSeq: 402,
molecule: OXYGEN ATOM
9fbn-C-401
sad. +0.40
ruf. +0.27
dom. +0.02
bre. -0.07
HIS chainID: C,
resSeq: 225,
molecule: Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup
oxidoreductase
oligomeric count: 6
pocket vol.: 443.0 Å3
d(Fe-oop): 0.042 Å
O chainID: C, resSeq: 402,
molecule: OXYGEN ATOM
9fbn-E-401
sad. +0.32
ruf. +0.37
dom. +0.09
bre. +0.08
HIS chainID: E,
resSeq: 225,
molecule: Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup
oxidoreductase
oligomeric count: 6
pocket vol.: 440.0 Å3
d(Fe-oop): 0.033 Å
O chainID: E, resSeq: 402,
molecule: OXYGEN ATOM
9fbn-F-401
sad. +0.28
ruf. +0.42
dom. -0.03
bre. -0.10
HIS chainID: F,
resSeq: 225,
molecule: Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup
oxidoreductase
oligomeric count: 6
pocket vol.: 449.0 Å3
d(Fe-oop): 0.035 Å
Not assigned.