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PyDISH No: 18663

PDB: 9f5x,
chainID: 3A, resSeq: 603
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.82 Å
origomeric count: 95

axial ligand #1: HIS

chainID: 3A,
resSeq: 60,
Coordination distance[Å]: 2.863
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Chlamydomonas reinhardtii

axial ligand #2: HIS

chainID: 3A,
resSeq: 372,
Coordination distance[Å]: 2.204
molecule: same as ligand #1

List of other hemes in pdb:9f5x

ID of heme	Distortion	Axial ligands on heme		Function & structure
9f5x-1A-403	`sad. -0.14 ruf. +0.09 dom. +0.21 bre. -0.10`	HIS	chainID: 1A, resSeq: 82, molecule: Cytochrome b	electron transporter oligomeric count: 95 pocket vol.: 475.0 Å³ d(Fe-oop): 0.339 Å
9f5x-1A-403	`sad. -0.14 ruf. +0.09 dom. +0.21 bre. -0.10`	HIS	chainID: 1A, resSeq: 183, molecule: Cytochrome b
9f5x-1A-404	`sad. -0.50 ruf. -0.64 dom. +0.03 bre. -0.02`	HIS	chainID: 1A, resSeq: 96, molecule: Cytochrome b	electron transporter oligomeric count: 95 pocket vol.: 458.0 Å³ d(Fe-oop): 0.209 Å
9f5x-1A-404	`sad. -0.50 ruf. -0.64 dom. +0.03 bre. -0.02`	HIS	chainID: 1A, resSeq: 197, molecule: Cytochrome b
9f5x-1B-403	`sad. -0.08 ruf. +0.46 dom. +0.33 bre. -0.12`	HIS	chainID: 1B, resSeq: 82, molecule: Cytochrome b	electron transporter oligomeric count: 95 pocket vol.: 448.0 Å³ d(Fe-oop): 0.230 Å
9f5x-1B-403	`sad. -0.08 ruf. +0.46 dom. +0.33 bre. -0.12`	HIS	chainID: 1B, resSeq: 183, molecule: Cytochrome b
9f5x-1B-404	`sad. -0.55 ruf. -0.51 dom. +0.04 bre. -0.06`	HIS	chainID: 1B, resSeq: 96, molecule: Cytochrome b	electron transporter oligomeric count: 95 pocket vol.: 446.0 Å³ d(Fe-oop): 0.217 Å
9f5x-1B-404	`sad. -0.55 ruf. -0.51 dom. +0.04 bre. -0.06`	HIS	chainID: 1B, resSeq: 197, molecule: Cytochrome b
9f5x-1E-404	`sad. +0.24 ruf. -0.34 dom. +0.04 bre. -0.15`	HIS	chainID: 1E, resSeq: 114, molecule: Cytochrome c1	oxidoreductase oligomeric count: 95 pocket vol.: 475.0 Å³ d(Fe-oop): 0.352 Å
9f5x-1E-404	`sad. +0.24 ruf. -0.34 dom. +0.04 bre. -0.15`	MET	chainID: 1E, resSeq: 233, molecule: Cytochrome c1
9f5x-1F-402	`sad. +0.35 ruf. -0.51 dom. +0.26 bre. -0.13`	HIS	chainID: 1F, resSeq: 114, molecule: Cytochrome c1	oxidoreductase oligomeric count: 95 pocket vol.: 490.0 Å³ d(Fe-oop): 0.237 Å
9f5x-1F-402	`sad. +0.35 ruf. -0.51 dom. +0.26 bre. -0.13`	MET	chainID: 1F, resSeq: 233, molecule: Cytochrome c1
9f5x-2A-602	`sad. -0.43 ruf. +0.20 dom. +0.50 bre. -0.52`	HIS	chainID: 2A, resSeq: 370, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 95 pocket vol.: 804.0 Å³ d(Fe-oop): 0.015 Å
9f5x-2A-602	`sad. -0.43 ruf. +0.20 dom. +0.50 bre. -0.52`	Not assigned.
9f5x-2A-603	`sad. -0.68 ruf. +0.53 dom. +0.42 bre. -0.48`	HIS	chainID: 2A, resSeq: 60, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 95 pocket vol.: 692.0 Å³ d(Fe-oop): 0.089 Å
9f5x-2A-603	`sad. -0.68 ruf. +0.53 dom. +0.42 bre. -0.48`	HIS	chainID: 2A, resSeq: 372, molecule: Cytochrome c oxidase subunit 1
9f5x-3A-602	`sad. -0.41 ruf. +0.04 dom. +0.47 bre. -0.50`	HIS	chainID: 3A, resSeq: 370, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 95 pocket vol.: 794.0 Å³ d(Fe-oop): 0.024 Å
9f5x-3A-602	`sad. -0.41 ruf. +0.04 dom. +0.47 bre. -0.50`	Not assigned.