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PyDISH No: 18525

PDB: 8zp8,
chainID: C1, resSeq: 603
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.97 Å
origomeric count: 79

axial ligand #1: HIS

chainID: C1,
resSeq: 376,
Coordination distance[Å]: 2.378
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Sus scrofa

List of other hemes in pdb:8zp8

ID of heme Distortion Axial ligands on heme Function & structure
8zp8-C1-602
sad. -0.03
ruf. +0.27
dom. +0.01
bre. -0.38
HIS chainID: C1,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 621.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: C1, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8zp8-QC-401
sad. +0.01
ruf. -0.30
dom. -0.06
bre. +0.04
HIS chainID: QC,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 412.0 Å3
d(Fe-oop): 0.022 Å
HIS chainID: QC, resSeq: 182,
molecule: Cytochrome b
8zp8-QC-402
sad. -0.12
ruf. -1.11
dom. +0.05
bre. +0.12
HIS chainID: QC,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 414.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: QC, resSeq: 196,
molecule: Cytochrome b
8zp8-QD-401
sad. +0.02
ruf. -0.12
dom. -0.19
bre. -0.04
HIS chainID: QD,
resSeq: 126,
molecule: Cytochrome c1, heme protein, mitochondrial
electron transporter
oligomeric count: 79
pocket vol.: 433.0 Å3
d(Fe-oop): 0.074 Å
MET chainID: QD, resSeq: 245,
molecule: Cytochrome c1, heme protein, mitochondrial
8zp8-Qc-403
sad. -0.00
ruf. -0.27
dom. -0.05
bre. +0.03
HIS chainID: Qc,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 409.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: Qc, resSeq: 182,
molecule: Cytochrome b
8zp8-Qc-404
sad. -0.13
ruf. -0.86
dom. +0.10
bre. +0.09
HIS chainID: Qc,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 413.0 Å3
d(Fe-oop): 0.035 Å
HIS chainID: Qc, resSeq: 196,
molecule: Cytochrome b
8zp8-Qd-401
sad. +0.00
ruf. -0.25
dom. -0.06
bre. -0.04
HIS chainID: Qd,
resSeq: 126,
molecule: Cytochrome c1, heme protein, mitochondrial
electron transporter
oligomeric count: 79
pocket vol.: 469.0 Å3
d(Fe-oop): 0.020 Å
MET chainID: Qd, resSeq: 245,
molecule: Cytochrome c1, heme protein, mitochondrial