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PyDISH No: 18503

PDB: 9ftz,
chainID: H, resSeq: 602
heme type: B

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.6 Å

axial ligand #1: HIS

chainID: H,
resSeq: 109,
Coordination distance[Å]: 2.094
molecule: Cytochrome bc1 complex cytochrome b subunit
EC number: 7.1.1.8
Organism: Mycolicibacterium smegmatis

axial ligand #2: HIS

chainID: H,
resSeq: 211,
Coordination distance[Å]: 2.511
molecule: same as ligand #1

List of other hemes in pdb:9ftz

ID of heme Distortion Axial ligands on heme Function & structure
9ftz-O-303
sad. +0.25
ruf. -0.90
dom. +0.05
bre. +0.04
HIS chainID: O,
resSeq: 192,
molecule: Cytochrome bc1 complex cytochrome c subunit
translocase
oligomeric count: 15
pocket vol.: 334.0 Å3
d(Fe-oop): 0.013 Å
MET chainID: O, resSeq: 229,
molecule: Cytochrome bc1 complex cytochrome c subunit
9ftz-O-304
sad. +0.02
ruf. -0.73
dom. +0.00
bre. -0.04
HIS chainID: O,
resSeq: 91,
molecule: Cytochrome bc1 complex cytochrome c subunit
translocase
oligomeric count: 15
pocket vol.: 398.0 Å3
d(Fe-oop): 0.016 Å
MET chainID: O, resSeq: 122,
molecule: Cytochrome bc1 complex cytochrome c subunit
9ftz-N-601
sad. -0.44
ruf. +0.07
dom. +0.07
bre. +0.17
HIS chainID: N,
resSeq: 109,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 15
pocket vol.: 400.0 Å3
d(Fe-oop): 0.085 Å
HIS chainID: N, resSeq: 211,
molecule: Cytochrome bc1 complex cytochrome b subunit
9ftz-N-605
sad. -1.06
ruf. -0.48
dom. +0.23
bre. +0.30
HIS chainID: N,
resSeq: 123,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 15
pocket vol.: 393.0 Å3
d(Fe-oop): 0.168 Å
HIS chainID: N, resSeq: 226,
molecule: Cytochrome bc1 complex cytochrome b subunit
9ftz-R-602
sad. -0.35
ruf. +0.06
dom. +0.23
bre. -0.47
HIS chainID: R,
resSeq: 397,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 15
pocket vol.: 803.0 Å3
d(Fe-oop): 0.075 Å
Not assigned.
9ftz-R-603
sad. -0.59
ruf. +0.78
dom. +0.52
bre. -0.46
HIS chainID: R,
resSeq: 86,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 15
pocket vol.: 739.0 Å3
d(Fe-oop): 0.081 Å
HIS chainID: R, resSeq: 399,
molecule: Cytochrome c oxidase subunit 1
9ftz-H-605
sad. -0.99
ruf. -0.53
dom. +0.13
bre. +0.36
HIS chainID: H,
resSeq: 123,
molecule: Cytochrome bc1 complex cytochrome b subunit
translocase
oligomeric count: 15
pocket vol.: 397.0 Å3
d(Fe-oop): 0.211 Å
HIS chainID: H, resSeq: 226,
molecule: Cytochrome bc1 complex cytochrome b subunit