Browser

PyDISH No: 18470

PDB: 8zno,
chainID: P, resSeq: 403
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.02 Å
origomeric count: 20

axial ligand #1: HIS

chainID: P,
resSeq: 107,
Coordination distance[Å]: 2.552
molecule: Cytochrome c domain-containing protein
Organism: Arachis hypogaea

axial ligand #2: MET

chainID: P,
resSeq: 226,
Coordination distance[Å]: 2.971
molecule: same as ligand #1

List of other hemes in pdb:8zno

ID of heme Distortion Axial ligands on heme Function & structure
8zno-C-403
sad. -0.04
ruf. +0.15
dom. +0.11
bre. -0.13
HIS chainID: C,
resSeq: 86,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 544.0 Å3
d(Fe-oop): 0.033 Å
HIS chainID: C, resSeq: 187,
molecule: Cytochrome b
8zno-C-404
sad. -0.37
ruf. -0.17
dom. +0.07
bre. -0.14
HIS chainID: C,
resSeq: 100,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 501.0 Å3
d(Fe-oop): 0.086 Å
HIS chainID: C, resSeq: 201,
molecule: Cytochrome b
8zno-D-402
sad. +0.17
ruf. +0.17
dom. -0.08
bre. -0.21
HIS chainID: D,
resSeq: 107,
molecule: Cytochrome c domain-containing protein
electron transporter
oligomeric count: 20
pocket vol.: 531.0 Å3
d(Fe-oop): 0.169 Å
MET chainID: D, resSeq: 226,
molecule: Cytochrome c domain-containing protein
8zno-O-403
sad. -0.01
ruf. +0.03
dom. +0.01
bre. -0.15
HIS chainID: O,
resSeq: 86,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 568.0 Å3
d(Fe-oop): 0.065 Å
HIS chainID: O, resSeq: 187,
molecule: Cytochrome b
8zno-O-404
sad. -0.26
ruf. -0.38
dom. +0.08
bre. -0.14
HIS chainID: O,
resSeq: 100,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 496.0 Å3
d(Fe-oop): 0.063 Å
HIS chainID: O, resSeq: 201,
molecule: Cytochrome b