Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 18470

PDB: 9fu0,
chainID: R, resSeq: 603
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.7 Å

axial ligand #1: HIS

chainID: R,
resSeq: 86,
Coordination distance[Å]: 2.19
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Mycolicibacterium smegmatis

axial ligand #2: HIS

chainID: R,
resSeq: 399,
Coordination distance[Å]: 2.187
molecule: same as ligand #1

List of other hemes in pdb:9fu0

ID of heme	Distortion	Axial ligands on heme		Function & structure
9fu0-O-302	`sad. +0.49 ruf. -0.29 dom. +0.17 bre. -0.23`	HIS	chainID: O, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit	translocase oligomeric count: 15 pocket vol.: 380.0 Å³ d(Fe-oop): 0.059 Å
9fu0-O-302	`sad. +0.49 ruf. -0.29 dom. +0.17 bre. -0.23`	MET	chainID: O, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit
9fu0-O-303	`sad. +0.26 ruf. +0.06 dom. +0.25 bre. -0.26`	HIS	chainID: O, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit	translocase oligomeric count: 15 pocket vol.: 381.0 Å³ d(Fe-oop): 0.012 Å
9fu0-O-303	`sad. +0.26 ruf. +0.06 dom. +0.25 bre. -0.26`	MET	chainID: O, resSeq: 122, molecule: Cytochrome bc1 complex cytochrome c subunit
9fu0-N-602	`sad. -0.62 ruf. -0.13 dom. +0.05 bre. -0.17`	HIS	chainID: N, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 382.0 Å³ d(Fe-oop): 0.055 Å
9fu0-N-602	`sad. -0.62 ruf. -0.13 dom. +0.05 bre. -0.17`	HIS	chainID: N, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit
9fu0-N-606	`sad. -1.13 ruf. -0.58 dom. -0.18 bre. -0.06`	HIS	chainID: N, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 365.0 Å³ d(Fe-oop): 0.127 Å
9fu0-N-606	`sad. -1.13 ruf. -0.58 dom. -0.18 bre. -0.06`	HIS	chainID: N, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit
9fu0-R-602	`sad. -0.35 ruf. +0.15 dom. +0.35 bre. -0.39`	HIS	chainID: R, resSeq: 397, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 15 pocket vol.: 796.0 Å³ d(Fe-oop): 0.040 Å
9fu0-R-602	`sad. -0.35 ruf. +0.15 dom. +0.35 bre. -0.39`	Not assigned.
9fu0-H-601	`sad. -0.47 ruf. -0.15 dom. -0.08 bre. -0.20`	HIS	chainID: H, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 382.0 Å³ d(Fe-oop): 0.032 Å
9fu0-H-601	`sad. -0.47 ruf. -0.15 dom. -0.08 bre. -0.20`	HIS	chainID: H, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit
9fu0-H-604	`sad. -1.04 ruf. -0.53 dom. -0.01 bre. -0.09`	HIS	chainID: H, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 412.0 Å³ d(Fe-oop): 0.026 Å
9fu0-H-604	`sad. -1.04 ruf. -0.53 dom. -0.01 bre. -0.09`	HIS	chainID: H, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit