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PyDISH No: 18462

PDB: 9ftz,
chainID: R, resSeq: 603
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 2.6 Å

axial ligand #1: HIS

chainID: R,
resSeq: 86,
Coordination distance[Å]: 2.228
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Mycolicibacterium smegmatis

axial ligand #2: HIS

chainID: R,
resSeq: 399,
Coordination distance[Å]: 2.209
molecule: same as ligand #1

List of other hemes in pdb:9ftz

ID of heme	Distortion	Axial ligands on heme		Function & structure
9ftz-O-303	`sad. +0.25 ruf. -0.90 dom. +0.05 bre. +0.04`	HIS	chainID: O, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit	translocase oligomeric count: 15 pocket vol.: 334.0 Å³ d(Fe-oop): 0.013 Å
9ftz-O-303	`sad. +0.25 ruf. -0.90 dom. +0.05 bre. +0.04`	MET	chainID: O, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit
9ftz-O-304	`sad. +0.02 ruf. -0.73 dom. +0.00 bre. -0.04`	HIS	chainID: O, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit	translocase oligomeric count: 15 pocket vol.: 398.0 Å³ d(Fe-oop): 0.016 Å
9ftz-O-304	`sad. +0.02 ruf. -0.73 dom. +0.00 bre. -0.04`	MET	chainID: O, resSeq: 122, molecule: Cytochrome bc1 complex cytochrome c subunit
9ftz-N-601	`sad. -0.44 ruf. +0.07 dom. +0.07 bre. +0.17`	HIS	chainID: N, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 400.0 Å³ d(Fe-oop): 0.085 Å
9ftz-N-601	`sad. -0.44 ruf. +0.07 dom. +0.07 bre. +0.17`	HIS	chainID: N, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit
9ftz-N-605	`sad. -1.06 ruf. -0.48 dom. +0.23 bre. +0.30`	HIS	chainID: N, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 393.0 Å³ d(Fe-oop): 0.168 Å
9ftz-N-605	`sad. -1.06 ruf. -0.48 dom. +0.23 bre. +0.30`	HIS	chainID: N, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit
9ftz-R-602	`sad. -0.35 ruf. +0.06 dom. +0.23 bre. -0.47`	HIS	chainID: R, resSeq: 397, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 15 pocket vol.: 803.0 Å³ d(Fe-oop): 0.075 Å
9ftz-R-602	`sad. -0.35 ruf. +0.06 dom. +0.23 bre. -0.47`	Not assigned.
9ftz-H-602	`sad. -0.29 ruf. +0.17 dom. -0.33 bre. +0.06`	HIS	chainID: H, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 361.0 Å³ d(Fe-oop): 0.117 Å
9ftz-H-602	`sad. -0.29 ruf. +0.17 dom. -0.33 bre. +0.06`	HIS	chainID: H, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit
9ftz-H-605	`sad. -0.99 ruf. -0.53 dom. +0.13 bre. +0.36`	HIS	chainID: H, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit	translocase oligomeric count: 15 pocket vol.: 397.0 Å³ d(Fe-oop): 0.211 Å
9ftz-H-605	`sad. -0.99 ruf. -0.53 dom. +0.13 bre. +0.36`	HIS	chainID: H, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit