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PyDISH No: 18449

PDB: 8zjc,
chainID: C, resSeq: 405
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.5 Å
origomeric count: 20

axial ligand #1: HIS

chainID: C,
resSeq: 82,
Coordination distance[Å]: 2.631
molecule: Cytochrome b
Organism: Saccharomyces cerevisiae

axial ligand #2: HIS

chainID: C,
resSeq: 183,
Coordination distance[Å]: 2.925
molecule: same as ligand #1

List of other hemes in pdb:8zjc

ID of heme Distortion Axial ligands on heme Function & structure
8zjc-C-408
sad. -0.49
ruf. -0.53
dom. +0.20
bre. -0.05
HIS chainID: C,
resSeq: 96,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 503.0 Å3
d(Fe-oop): 0.057 Å
HIS chainID: C, resSeq: 197,
molecule: Cytochrome b
8zjc-D-401
sad. +0.30
ruf. +0.15
dom. -0.33
bre. -0.11
HIS chainID: D,
resSeq: 105,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 20
pocket vol.: 542.0 Å3
d(Fe-oop): 0.032 Å
MET chainID: D, resSeq: 225,
molecule: Cytochrome c1, heme protein, mitochondrial
8zjc-N-402
sad. +0.11
ruf. -0.12
dom. -0.06
bre. -0.08
HIS chainID: N,
resSeq: 82,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 537.0 Å3
d(Fe-oop): 0.176 Å
HIS chainID: N, resSeq: 183,
molecule: Cytochrome b
8zjc-N-403
sad. -0.47
ruf. -0.54
dom. +0.20
bre. -0.05
HIS chainID: N,
resSeq: 96,
molecule: Cytochrome b
electron transporter
oligomeric count: 20
pocket vol.: 496.0 Å3
d(Fe-oop): 0.050 Å
HIS chainID: N, resSeq: 197,
molecule: Cytochrome b
8zjc-O-401
sad. +0.23
ruf. -0.21
dom. +0.38
bre. -0.12
HIS chainID: O,
resSeq: 105,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 20
pocket vol.: 525.0 Å3
d(Fe-oop): 0.052 Å
MET chainID: O, resSeq: 225,
molecule: Cytochrome c1, heme protein, mitochondrial