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PyDISH No: 18433

PDB: 9az2,
chainID: F, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.52 Å

axial ligand #1: HIS

chainID: F,
resSeq: 335,
Coordination distance[Å]: 2.113
molecule: Deferrochelatase
EC number: 1.11.1.-
Organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)

axial ligand #2: OXY

chainID: F,
resSeq: 502,
Coordination distance[Å]: 2.814
molecule: OXYGEN MOLECULE

List of other hemes in pdb:9az2

ID of heme Distortion Axial ligands on heme Function & structure
9az2-A-501
sad. +0.04
ruf. -0.09
dom. -0.13
bre. -0.22
HIS chainID: A,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 388.0 Å3
d(Fe-oop): 0.020 Å
OXY chainID: A, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-B-501
sad. +0.10
ruf. -0.01
dom. +0.16
bre. -0.20
HIS chainID: B,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 421.0 Å3
d(Fe-oop): 0.056 Å
OXY chainID: B, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-C-501
sad. +0.17
ruf. +0.16
dom. +0.11
bre. -0.22
HIS chainID: C,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 410.0 Å3
d(Fe-oop): 0.024 Å
OXY chainID: C, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-D-501
sad. +0.08
ruf. +0.04
dom. -0.04
bre. -0.21
HIS chainID: D,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 402.0 Å3
d(Fe-oop): 0.044 Å
OXY chainID: D, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-E-501
sad. +0.11
ruf. -0.21
dom. -0.23
bre. -0.21
HIS chainID: E,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 400.0 Å3
d(Fe-oop): 0.077 Å
OXY chainID: E, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-G-501
sad. +0.21
ruf. +0.06
dom. -0.07
bre. -0.19
HIS chainID: G,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 404.0 Å3
d(Fe-oop): 0.442 Å
OXY chainID: G, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-H-501
sad. +0.06
ruf. +0.17
dom. +0.03
bre. -0.21
HIS chainID: H,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 391.0 Å3
d(Fe-oop): 0.052 Å
OXY chainID: H, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-I-501
sad. +0.08
ruf. -0.27
dom. +0.05
bre. -0.22
HIS chainID: I,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 407.0 Å3
d(Fe-oop): 0.026 Å
OXY chainID: I, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-J-501
sad. +0.20
ruf. +0.05
dom. +0.06
bre. -0.21
HIS chainID: J,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 407.0 Å3
d(Fe-oop): 0.052 Å
OXY chainID: J, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-K-501
sad. +0.13
ruf. -0.19
dom. -0.19
bre. -0.22
HIS chainID: K,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 407.0 Å3
d(Fe-oop): 0.004 Å
OXY chainID: K, resSeq: 502,
molecule: OXYGEN MOLECULE
9az2-L-501
sad. +0.27
ruf. +0.09
dom. +0.16
bre. -0.20
HIS chainID: L,
resSeq: 335,
molecule: Deferrochelatase
oxidoreductase
oligomeric count: 1
pocket vol.: 404.0 Å3
d(Fe-oop): 0.023 Å
OXY chainID: L, resSeq: 502,
molecule: OXYGEN MOLECULE