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PyDISH No: 18406

PDB: 8zp0,
chainID: a, resSeq: 404
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.44 Å

axial ligand #1: HIS

chainID: a,
resSeq: 97,
Coordination distance[Å]: 2.636
molecule: Cytochrome b
Organism: Sus scrofa

axial ligand #2: HIS

chainID: a,
resSeq: 196,
Coordination distance[Å]: 2.626
molecule: same as ligand #1

List of other hemes in pdb:8zp0

ID of heme Distortion Axial ligands on heme Function & structure
8zp0-A-403
sad. -0.60
ruf. -0.45
dom. +0.18
bre. -0.20
HIS chainID: A,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 516.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: A, resSeq: 196,
molecule: Cytochrome b
8zp0-A-404
sad. +0.06
ruf. -0.16
dom. -0.10
bre. -0.18
HIS chainID: A,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 556.0 Å3
d(Fe-oop): 0.109 Å
HIS chainID: A, resSeq: 182,
molecule: Cytochrome b
8zp0-B-401
sad. -0.02
ruf. +0.29
dom. -0.33
bre. -0.54
HIS chainID: B,
resSeq: 126,
molecule: Cytochrome c1, heme protein, mitochondrial
electron transporter
oligomeric count: 22
pocket vol.: 505.0 Å3
d(Fe-oop): 0.120 Å
MET chainID: B, resSeq: 245,
molecule: Cytochrome c1, heme protein, mitochondrial
8zp0-a-403
sad. +0.01
ruf. -0.13
dom. -0.16
bre. -0.16
HIS chainID: a,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 539.0 Å3
d(Fe-oop): 0.163 Å
HIS chainID: a, resSeq: 182,
molecule: Cytochrome b
8zp0-b-401
sad. -0.06
ruf. +0.41
dom. -0.39
bre. -0.53
HIS chainID: b,
resSeq: 126,
molecule: Cytochrome c1, heme protein, mitochondrial
electron transporter
oligomeric count: 22
pocket vol.: 507.0 Å3
d(Fe-oop): 0.143 Å
MET chainID: b, resSeq: 245,
molecule: Cytochrome c1, heme protein, mitochondrial