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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 2.58 Å
origomeric count: 20
axial ligand #1: HIS
chainID: O,resSeq: 105,
Coordination distance[Å]: 2.736
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 7.1.1.8
Organism: Saccharomyces cerevisiae
axial ligand #2: MET
chainID: O,resSeq: 225,
Coordination distance[Å]: 3.009
molecule: same as ligand #1
List of other hemes in pdb:8yil
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8yil-C-404 |
sad. +0.26 ruf. -0.22 dom. -0.03 bre. -0.11 |
HIS | chainID: C, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 521.0 Å3 d(Fe-oop): 0.122 Å |
| HIS | chainID: C, resSeq: 183, molecule: Cytochrome b |
|||
8yil-C-408 |
sad. -0.61 ruf. -0.56 dom. +0.12 bre. -0.05 |
HIS | chainID: C, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 483.0 Å3 d(Fe-oop): 0.012 Å |
| HIS | chainID: C, resSeq: 197, molecule: Cytochrome b |
|||
8yil-D-401 |
sad. +0.06 ruf. -0.08 dom. +0.09 bre. -0.07 |
HIS | chainID: D, resSeq: 105, molecule: Cytochrome c1, heme protein, mitochondrial |
translocase oligomeric count: 20 pocket vol.: 542.0 Å3 d(Fe-oop): 0.004 Å |
| MET | chainID: D, resSeq: 225, molecule: Cytochrome c1, heme protein, mitochondrial |
|||
8yil-N-404 |
sad. +0.18 ruf. -0.09 dom. -0.04 bre. -0.13 |
HIS | chainID: N, resSeq: 82, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 530.0 Å3 d(Fe-oop): 0.111 Å |
| HIS | chainID: N, resSeq: 183, molecule: Cytochrome b |
|||
8yil-N-405 |
sad. -0.64 ruf. -0.48 dom. +0.14 bre. -0.07 |
HIS | chainID: N, resSeq: 96, molecule: Cytochrome b |
electron transporter oligomeric count: 20 pocket vol.: 489.0 Å3 d(Fe-oop): 0.022 Å |
| HIS | chainID: N, resSeq: 197, molecule: Cytochrome b |
|||