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PyDISH No: 18222

PDB: 8vzv,
chainID: DDD, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.29 Å

axial ligand #1: HIS

chainID: DDD,
resSeq: 328,
Coordination distance[Å]: 2.117
molecule: Tryptophan 2,3-dioxygenase
EC number: 1.13.11.11
Organism: Homo sapiens

axial ligand #2: HOH

chainID: DDD,
resSeq: 502,
Coordination distance[Å]: 2.531
molecule: water

List of other hemes in pdb:8vzv

ID of heme Distortion Axial ligands on heme Function & structure
8vzv-AAA-401
sad. +0.11
ruf. -0.26
dom. -0.18
bre. +0.01
HIS chainID: AAA,
resSeq: 328,
molecule: Tryptophan 2,3-dioxygenase
oxidoreductase
oligomeric count: 4
pocket vol.: 494.0 Å3
d(Fe-oop): 0.074 Å
HOH chainID: AAA, resSeq: 501,
molecule: water
8vzv-BBB-401
sad. +0.09
ruf. -0.32
dom. +0.01
bre. +0.00
HIS chainID: BBB,
resSeq: 328,
molecule: Tryptophan 2,3-dioxygenase
oxidoreductase
oligomeric count: 4
pocket vol.: 443.0 Å3
d(Fe-oop): 0.024 Å
HOH chainID: BBB, resSeq: 501,
molecule: water
8vzv-CCC-401
sad. +0.02
ruf. -0.10
dom. +0.16
bre. -0.03
HIS chainID: CCC,
resSeq: 328,
molecule: Tryptophan 2,3-dioxygenase
oxidoreductase
oligomeric count: 4
pocket vol.: 487.0 Å3
d(Fe-oop): 0.059 Å
HOH chainID: CCC, resSeq: 517,
molecule: water