Browser
Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 6.5 Å
origomeric count: 162
axial ligand #1: HIS
chainID: 6C,resSeq: 83,
Coordination distance[Å]: 2.388
molecule: Cytochrome b
Organism: Sus scrofa
axial ligand #2: HIS
chainID: 6C,resSeq: 182,
Coordination distance[Å]: 2.427
molecule: same as ligand #1
List of other hemes in pdb:8ugr
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8ugr-3C-501 |
sad. -0.07 ruf. -0.75 dom. +0.01 bre. +0.10 |
HIS | chainID: 3C, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 346.0 Å3 d(Fe-oop): 0.024 Å |
| HIS | chainID: 3C, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-3C-502 |
sad. -0.54 ruf. -0.54 dom. +0.43 bre. +0.12 |
HIS | chainID: 3C, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 375.0 Å3 d(Fe-oop): 0.026 Å |
| HIS | chainID: 3C, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-3D-501 |
sad. +0.01 ruf. -0.40 dom. +0.32 bre. -0.63 |
HIS | chainID: 3D, resSeq: 129, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 465.0 Å3 d(Fe-oop): 0.113 Å |
| MET | chainID: 3D, resSeq: 249, molecule: Cytochrome c1 |
|||
8ugr-3P-501 |
sad. +0.07 ruf. -0.35 dom. -0.21 bre. +0.01 |
HIS | chainID: 3P, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 438.0 Å3 d(Fe-oop): 0.060 Å |
| HIS | chainID: 3P, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-3P-502 |
sad. -0.55 ruf. -0.73 dom. +0.27 bre. +0.08 |
HIS | chainID: 3P, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 375.0 Å3 d(Fe-oop): 0.073 Å |
| HIS | chainID: 3P, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-3Q-501 |
sad. +0.02 ruf. -0.56 dom. +0.34 bre. -0.62 |
HIS | chainID: 3Q, resSeq: 41, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 465.0 Å3 d(Fe-oop): 0.127 Å |
| MET | chainID: 3Q, resSeq: 160, molecule: Cytochrome c1 |
|||
8ugr-4A-605 |
sad. -0.62 ruf. +0.37 dom. +0.42 bre. -0.47 |
HIS | chainID: 4A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 600.0 Å3 d(Fe-oop): 0.091 Å |
| HIS | chainID: 4A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1 |
|||
8ugr-4A-606 |
sad. -0.45 ruf. +0.02 dom. +0.51 bre. -0.52 |
HIS | chainID: 4A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 677.0 Å3 d(Fe-oop): 0.026 Å |
| Not assigned. | ||||
8ugr-6C-502 |
sad. -0.51 ruf. -1.21 dom. +0.50 bre. +0.27 |
HIS | chainID: 6C, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 330.0 Å3 d(Fe-oop): 0.009 Å |
| HIS | chainID: 6C, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-6D-501 |
sad. -0.01 ruf. -1.83 dom. +0.22 bre. -0.36 |
CYS | chainID: 6D, resSeq: 128, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 403.0 Å3 d(Fe-oop): 0.078 Å |
| MET | chainID: 6D, resSeq: 249, molecule: Cytochrome c1 |
|||
8ugr-6P-501 |
sad. +0.07 ruf. -0.35 dom. -0.21 bre. +0.01 |
HIS | chainID: 6P, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 424.0 Å3 d(Fe-oop): 0.059 Å |
| HIS | chainID: 6P, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-6P-502 |
sad. -0.55 ruf. -0.73 dom. +0.27 bre. +0.08 |
HIS | chainID: 6P, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 390.0 Å3 d(Fe-oop): 0.073 Å |
| HIS | chainID: 6P, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-6Q-501 |
sad. +0.02 ruf. -0.56 dom. +0.34 bre. -0.62 |
HIS | chainID: 6Q, resSeq: 41, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 466.0 Å3 d(Fe-oop): 0.127 Å |
| MET | chainID: 6Q, resSeq: 160, molecule: Cytochrome c1 |
|||
8ugr-8A-605 |
sad. -0.62 ruf. +0.36 dom. +0.42 bre. -0.47 |
HIS | chainID: 8A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 602.0 Å3 d(Fe-oop): 0.091 Å |
| HIS | chainID: 8A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1 |
|||
8ugr-8A-606 |
sad. -0.45 ruf. +0.02 dom. +0.51 bre. -0.52 |
HIS | chainID: 8A, resSeq: 240, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 638.0 Å3 d(Fe-oop): 0.025 Å |
| HIS | chainID: 8A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1 |
|||