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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 6.5 Å
axial ligand #1: HIS
chainID: 3D,resSeq: 129,
Coordination distance[Å]: 1.91
molecule: Cytochrome c1
Organism: Sus scrofa
List of other hemes in pdb:8ugr
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8ugr-3C-501 |
sad. +0.01 ruf. -0.57 dom. +0.07 bre. +0.06 |
HIS | chainID: 3C, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 408.0 Å3 d(Fe-oop): 0.024 Å |
| HIS | chainID: 3C, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-3C-502 |
sad. -0.49 ruf. -0.99 dom. +0.32 bre. +0.15 |
HIS | chainID: 3C, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 444.0 Å3 d(Fe-oop): 0.047 Å |
| HIS | chainID: 3C, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-3P-501 |
sad. +0.10 ruf. -0.37 dom. -0.39 bre. +0.08 |
HIS | chainID: 3P, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 393.0 Å3 d(Fe-oop): 0.103 Å |
| HIS | chainID: 3P, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-3P-502 |
sad. -0.49 ruf. -1.04 dom. +0.28 bre. +0.15 |
HIS | chainID: 3P, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 429.0 Å3 d(Fe-oop): 0.059 Å |
| HIS | chainID: 3P, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-3Q-501 |
sad. +0.06 ruf. -1.14 dom. +0.27 bre. -0.53 |
HIS | chainID: 3Q, resSeq: 41, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 485.0 Å3 d(Fe-oop): 0.096 Å |
| Not assigned. | ||||
8ugr-4A-604 |
sad. -0.77 ruf. +2.05 dom. +0.62 bre. -0.02 |
HIS | chainID: 4A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 752.0 Å3 d(Fe-oop): 0.037 Å |
| HIS | chainID: 4A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1 |
|||
8ugr-4A-605 |
sad. -0.61 ruf. +0.94 dom. +0.71 bre. -0.31 |
HIS | chainID: 4A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 675.0 Å3 d(Fe-oop): 0.009 Å |
| Not assigned. | ||||
8ugr-6C-501 |
sad. +0.12 ruf. -0.37 dom. -0.04 bre. +0.06 |
HIS | chainID: 6C, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 408.0 Å3 d(Fe-oop): 0.026 Å |
| HIS | chainID: 6C, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-6C-502 |
sad. -0.43 ruf. -1.22 dom. +0.27 bre. +0.16 |
HIS | chainID: 6C, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 436.0 Å3 d(Fe-oop): 0.043 Å |
| HIS | chainID: 6C, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-6D-501 |
sad. -0.05 ruf. -0.84 dom. +0.37 bre. -0.60 |
HIS | chainID: 6D, resSeq: 129, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 473.0 Å3 d(Fe-oop): 0.126 Å |
| MET | chainID: 6D, resSeq: 249, molecule: Cytochrome c1 |
|||
8ugr-6P-501 |
sad. +0.09 ruf. -0.65 dom. -0.29 bre. +0.12 |
HIS | chainID: 6P, resSeq: 83, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 425.0 Å3 d(Fe-oop): 0.077 Å |
| HIS | chainID: 6P, resSeq: 182, molecule: Cytochrome b |
|||
8ugr-6P-502 |
sad. -0.42 ruf. -1.04 dom. +0.18 bre. +0.13 |
HIS | chainID: 6P, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 162 pocket vol.: 401.0 Å3 d(Fe-oop): 0.064 Å |
| HIS | chainID: 6P, resSeq: 196, molecule: Cytochrome b |
|||
8ugr-6Q-501 |
sad. +0.01 ruf. -1.60 dom. +0.19 bre. -0.42 |
HIS | chainID: 6Q, resSeq: 41, molecule: Cytochrome c1 |
electron transporter oligomeric count: 162 pocket vol.: 534.0 Å3 d(Fe-oop): 0.071 Å |
| MET | chainID: 6Q, resSeq: 160, molecule: Cytochrome c1 |
|||
8ugr-8A-606 |
sad. -0.79 ruf. +1.99 dom. +0.31 bre. -0.10 |
HIS | chainID: 8A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 707.0 Å3 d(Fe-oop): 0.121 Å |
| HIS | chainID: 8A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1 |
|||
8ugr-8A-607 |
sad. -0.74 ruf. +0.60 dom. +0.77 bre. -0.31 |
HIS | chainID: 8A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 162 pocket vol.: 655.0 Å3 d(Fe-oop): 0.003 Å |
| Not assigned. | ||||