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PyDISH No: 18124

PDB: 8ugi,
chainID: 3D, resSeq: 501
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.1 Å

axial ligand #1: HIS

chainID: 3D,
resSeq: 129,
Coordination distance[Å]: 2.22
molecule: Cytochrome c1, heme protein, mitochondrial
Organism: Sus scrofa

axial ligand #2: MET

chainID: 3D,
resSeq: 249,
Coordination distance[Å]: 2.975
molecule: same as ligand #1

List of other hemes in pdb:8ugi

ID of heme	Distortion	Axial ligands on heme		Function & structure
8ugi-3C-501	`sad. +0.08 ruf. -0.19 dom. +0.06 bre. +0.02`	HIS	chainID: 3C, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 425.0 Å³ d(Fe-oop): 0.046 Å
8ugi-3C-501	`sad. +0.08 ruf. -0.19 dom. +0.06 bre. +0.02`	HIS	chainID: 3C, resSeq: 182, molecule: Cytochrome b
8ugi-3C-502	`sad. -0.62 ruf. -0.56 dom. +0.33 bre. +0.07`	HIS	chainID: 3C, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 403.0 Å³ d(Fe-oop): 0.076 Å
8ugi-3C-502	`sad. -0.62 ruf. -0.56 dom. +0.33 bre. +0.07`	HIS	chainID: 3C, resSeq: 196, molecule: Cytochrome b
8ugi-3P-501	`sad. +0.09 ruf. -0.22 dom. -0.23 bre. +0.00`	HIS	chainID: 3P, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 426.0 Å³ d(Fe-oop): 0.066 Å
8ugi-3P-501	`sad. +0.09 ruf. -0.22 dom. -0.23 bre. +0.00`	HIS	chainID: 3P, resSeq: 182, molecule: Cytochrome b
8ugi-3P-502	`sad. -0.57 ruf. -0.64 dom. +0.27 bre. +0.09`	HIS	chainID: 3P, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 81 pocket vol.: 367.0 Å³ d(Fe-oop): 0.081 Å
8ugi-3P-502	`sad. -0.57 ruf. -0.64 dom. +0.27 bre. +0.09`	HIS	chainID: 3P, resSeq: 196, molecule: Cytochrome b
8ugi-3Q-501	`sad. +0.00 ruf. -0.46 dom. +0.41 bre. -0.60`	HIS	chainID: 3Q, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	electron transporter oligomeric count: 81 pocket vol.: 440.0 Å³ d(Fe-oop): 0.150 Å
8ugi-3Q-501	`sad. +0.00 ruf. -0.46 dom. +0.41 bre. -0.60`	MET	chainID: 3Q, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
8ugi-4A-604	`sad. -0.70 ruf. +0.62 dom. +0.51 bre. -0.44`	HIS	chainID: 4A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 81 pocket vol.: 600.0 Å³ d(Fe-oop): 0.074 Å
8ugi-4A-604	`sad. -0.70 ruf. +0.62 dom. +0.51 bre. -0.44`	HIS	chainID: 4A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
8ugi-4A-605	`sad. -0.56 ruf. +0.10 dom. +0.59 bre. -0.50`	HIS	chainID: 4A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 81 pocket vol.: 696.0 Å³ d(Fe-oop): 0.023 Å
8ugi-4A-605	`sad. -0.56 ruf. +0.10 dom. +0.59 bre. -0.50`	Not assigned.