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Protein data
function: electron transporterexperiment: ELECTRON MICROSCOPY
resolution: 2.7 Å
axial ligand #1: MET
chainID: G,resSeq: 195,
Coordination distance[Å]: 3.035
molecule: Cbb3-type cytochrome c oxidase subunit
Organism: Pseudomonas aeruginosa
axial ligand #2: HIS
chainID: G,resSeq: 246,
Coordination distance[Å]: 2.049
molecule: same as ligand #1
List of other hemes in pdb:8smr
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8smr-I-501 |
sad. -0.59 ruf. -0.43 dom. +0.12 bre. -0.13 |
HIS | chainID: I, resSeq: 101, molecule: Cytochrome b |
electron transporter oligomeric count: 13 pocket vol.: 360.0 Å3 d(Fe-oop): 0.183 Å |
| HIS | chainID: I, resSeq: 203, molecule: Cytochrome b |
|||
8smr-I-502 |
sad. -0.02 ruf. -0.05 dom. +0.17 bre. -0.21 |
HIS | chainID: I, resSeq: 87, molecule: Cytochrome b |
electron transporter oligomeric count: 13 pocket vol.: 366.0 Å3 d(Fe-oop): 0.205 Å |
| HIS | chainID: I, resSeq: 188, molecule: Cytochrome b |
|||
8smr-J-500 |
sad. +0.14 ruf. -0.10 dom. +0.05 bre. -0.26 |
HIS | chainID: J, resSeq: 55, molecule: Cytochrome c1 |
electron transporter oligomeric count: 13 pocket vol.: 322.0 Å3 d(Fe-oop): 0.032 Å |
| MET | chainID: J, resSeq: 150, molecule: Cytochrome c1 |
|||
8smr-K-501 |
sad. +0.30 ruf. -0.03 dom. +0.15 bre. -0.25 |
HIS | chainID: K, resSeq: 134, molecule: Cytochrome c4 |
electron transporter oligomeric count: 13 pocket vol.: 304.0 Å3 d(Fe-oop): 0.194 Å |
| MET | chainID: K, resSeq: 178, molecule: Cytochrome c4 |
|||
8smr-K-502 |
sad. +0.25 ruf. -0.00 dom. +0.01 bre. -0.24 |
HIS | chainID: K, resSeq: 38, molecule: Cytochrome c4 |
electron transporter oligomeric count: 13 pocket vol.: 328.0 Å3 d(Fe-oop): 0.237 Å |
| MET | chainID: K, resSeq: 77, molecule: Cytochrome c4 |
|||
8smr-D-501 |
sad. -0.53 ruf. -0.60 dom. +0.36 bre. -0.13 |
HIS | chainID: D, resSeq: 101, molecule: Cytochrome b |
electron transporter oligomeric count: 13 pocket vol.: 373.0 Å3 d(Fe-oop): 0.122 Å |
| HIS | chainID: D, resSeq: 203, molecule: Cytochrome b |
|||
8smr-D-502 |
sad. +0.00 ruf. +0.14 dom. +0.23 bre. -0.20 |
HIS | chainID: D, resSeq: 87, molecule: Cytochrome b |
electron transporter oligomeric count: 13 pocket vol.: 370.0 Å3 d(Fe-oop): 0.219 Å |
| HIS | chainID: D, resSeq: 188, molecule: Cytochrome b |
|||
8smr-M-500 |
sad. +0.16 ruf. -0.13 dom. +0.14 bre. -0.25 |
HIS | chainID: M, resSeq: 55, molecule: Cytochrome c1 |
electron transporter oligomeric count: 13 pocket vol.: 310.0 Å3 d(Fe-oop): 0.137 Å |
| MET | chainID: M, resSeq: 150, molecule: Cytochrome c1 |
|||
8smr-N-501 |
sad. +0.21 ruf. -0.19 dom. +0.31 bre. -0.25 |
HIS | chainID: N, resSeq: 134, molecule: Cytochrome c4 |
electron transporter oligomeric count: 13 pocket vol.: 314.0 Å3 d(Fe-oop): 0.230 Å |
| MET | chainID: N, resSeq: 178, molecule: Cytochrome c4 |
|||
8smr-N-502 |
sad. +0.35 ruf. +0.10 dom. -0.00 bre. -0.25 |
HIS | chainID: N, resSeq: 38, molecule: Cytochrome c4 |
electron transporter oligomeric count: 13 pocket vol.: 320.0 Å3 d(Fe-oop): 0.086 Å |
| MET | chainID: N, resSeq: 77, molecule: Cytochrome c4 |
|||
8smr-E-504 |
sad. +0.30 ruf. -0.15 dom. +0.11 bre. -0.19 |
HIS | chainID: E, resSeq: 61, molecule: cytochrome-c oxidase |
translocase oligomeric count: 13 pocket vol.: 394.0 Å3 d(Fe-oop): 0.175 Å |
| HIS | chainID: E, resSeq: 348, molecule: cytochrome-c oxidase |
|||
8smr-E-505 |
sad. +1.33 ruf. +0.32 dom. +0.55 bre. +0.01 |
HIS | chainID: E, resSeq: 346, molecule: cytochrome-c oxidase |
translocase oligomeric count: 13 pocket vol.: 423.0 Å3 d(Fe-oop): 0.025 Å |
| Not assigned. | ||||
8smr-F-301 |
sad. +0.54 ruf. -0.20 dom. +0.17 bre. -0.25 |
HIS | chainID: F, resSeq: 69, molecule: Cbb3-type Cytochrome C oxidase subunit II |
electron transporter oligomeric count: 13 pocket vol.: 334.0 Å3 d(Fe-oop): 0.091 Å |
| MET | chainID: F, resSeq: 137, molecule: Cbb3-type Cytochrome C oxidase subunit II |
|||
8smr-G-401 |
sad. -0.21 ruf. -0.59 dom. +0.16 bre. -0.18 |
HIS | chainID: G, resSeq: 156, molecule: Cbb3-type cytochrome c oxidase subunit |
electron transporter oligomeric count: 13 pocket vol.: 336.0 Å3 d(Fe-oop): 0.086 Å |
| MET | chainID: G, resSeq: 288, molecule: Cbb3-type cytochrome c oxidase subunit |
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