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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.6 Å
axial ligand #1: HIS
chainID: YYY,resSeq: 247,
Coordination distance[Å]: 1.947
molecule: Octaheme nitrite c cytochrome c reductase
Organism: Trichlorobacter ammonificans
axial ligand #2: HIS
chainID: YYY,resSeq: 407,
Coordination distance[Å]: 1.914
molecule: same as ligand #1
List of other hemes in pdb:8rvm
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8rvm-YYY-601 |
sad. -0.01 ruf. -0.92 dom. -0.04 bre. -0.23 |
HIS | chainID: YYY, resSeq: 46, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 549.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: YYY, resSeq: 73, molecule: Octaheme nitrite c cytochrome c reductase |
|||
8rvm-YYY-602 |
sad. -0.03 ruf. -0.48 dom. -0.03 bre. -0.25 |
HIS | chainID: YYY, resSeq: 67, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 368.0 Å3 d(Fe-oop): 0.004 Å |
| HIS | chainID: YYY, resSeq: 250, molecule: Octaheme nitrite c cytochrome c reductase |
|||
8rvm-YYY-603 |
sad. +0.23 ruf. -0.52 dom. -0.18 bre. -0.38 |
HIS | chainID: YYY, resSeq: 58, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 559.0 Å3 d(Fe-oop): 0.047 Å |
| HIS | chainID: YYY, resSeq: 95, molecule: Octaheme nitrite c cytochrome c reductase |
|||
8rvm-YYY-604 |
sad. +0.35 ruf. -0.57 dom. +0.05 bre. -0.28 |
LYS | chainID: YYY, resSeq: 206, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 395.0 Å3 d(Fe-oop): 0.062 Å |
| PO4 | chainID: YYY, resSeq: 609, molecule: PHOSPHATE ION |
|||
8rvm-YYY-606 |
sad. -0.27 ruf. -1.01 dom. +0.13 bre. -0.14 |
HIS | chainID: YYY, resSeq: 145, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 399.0 Å3 d(Fe-oop): 0.009 Å |
| HIS | chainID: YYY, resSeq: 309, molecule: Octaheme nitrite c cytochrome c reductase |
|||
8rvm-YYY-607 |
sad. +0.81 ruf. -1.11 dom. -0.12 bre. -0.02 |
HIS | chainID: YYY, resSeq: 392, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 373.0 Å3 d(Fe-oop): 0.043 Å |
| HIS | chainID: YYY, resSeq: 500, molecule: Octaheme nitrite c cytochrome c reductase |
|||
8rvm-YYY-608 |
sad. -0.15 ruf. -1.70 dom. +0.11 bre. -0.07 |
HIS | chainID: YYY, resSeq: 381, molecule: Octaheme nitrite c cytochrome c reductase |
oxidoreductase oligomeric count: 3 pocket vol.: 536.0 Å3 d(Fe-oop): 0.028 Å |
| HIS | chainID: YYY, resSeq: 424, molecule: Octaheme nitrite c cytochrome c reductase |
|||