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PyDISH No: 17709

PDB: 8qc9,
chainID: A, resSeq: 703
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 230,
Coordination distance[Å]: 2.109
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
Organism: Shewanella oneidensis MR-1

axial ligand #2: HIS

chainID: A,
resSeq: 261,
Coordination distance[Å]: 2.174
molecule: same as ligand #1

List of other hemes in pdb:8qc9

ID of heme Distortion Axial ligands on heme Function & structure
8qc9-A-701
sad. -0.30
ruf. -0.46
dom. +0.13
bre. -0.20
HIS chainID: A,
resSeq: 190,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 453.0 Å3
d(Fe-oop): 0.064 Å
HIS chainID: A, resSeq: 233,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-702
sad. +0.23
ruf. -0.06
dom. -0.04
bre. -0.17
HIS chainID: A,
resSeq: 198,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 437.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: A, resSeq: 210,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-704
sad. +0.48
ruf. -0.17
dom. +0.14
bre. -0.17
HIS chainID: A,
resSeq: 286,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 599.0 Å3
d(Fe-oop): 0.074 Å
HIS chainID: A, resSeq: 319,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-705
sad. +0.05
ruf. -0.63
dom. -0.07
bre. -0.21
HIS chainID: A,
resSeq: 297,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 595.0 Å3
d(Fe-oop): 0.090 Å
HIS chainID: A, resSeq: 310,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-706
sad. +0.41
ruf. -0.59
dom. -0.03
bre. -0.18
HIS chainID: A,
resSeq: 500,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 504.0 Å3
d(Fe-oop): 0.068 Å
HIS chainID: A, resSeq: 564,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-707
sad. -0.06
ruf. -0.21
dom. -0.00
bre. -0.25
HIS chainID: A,
resSeq: 507,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 467.0 Å3
d(Fe-oop): 0.089 Å
HIS chainID: A, resSeq: 542,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-708
sad. +0.32
ruf. -0.02
dom. -0.03
bre. -0.20
HIS chainID: A,
resSeq: 561,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 442.0 Å3
d(Fe-oop): 0.044 Å
HIS chainID: A, resSeq: 580,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-709
sad. +0.07
ruf. +0.06
dom. -0.01
bre. -0.25
HIS chainID: A,
resSeq: 618,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 630.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 666,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qc9-A-710
sad. +0.32
ruf. -0.35
dom. -0.03
bre. -0.22
HIS chainID: A,
resSeq: 627,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 527.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: A, resSeq: 659,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC