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PyDISH No: 17701

PDB: 8qbz,
chainID: A, resSeq: 805
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.9 Å

axial ligand #1: HIS

chainID: A,
resSeq: 297,
Coordination distance[Å]: 2.04
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
Organism: Shewanella oneidensis MR-1

axial ligand #2: HIS

chainID: A,
resSeq: 310,
Coordination distance[Å]: 1.977
molecule: same as ligand #1

List of other hemes in pdb:8qbz

ID of heme Distortion Axial ligands on heme Function & structure
8qbz-A-801
sad. -0.27
ruf. -0.60
dom. -0.02
bre. -0.37
HIS chainID: A,
resSeq: 190,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 435.0 Å3
d(Fe-oop): 0.018 Å
HIS chainID: A, resSeq: 233,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-802
sad. +0.11
ruf. -0.13
dom. -0.09
bre. -0.44
HIS chainID: A,
resSeq: 198,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 413.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 210,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-803
sad. -0.19
ruf. -0.27
dom. +0.02
bre. -0.44
HIS chainID: A,
resSeq: 230,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 398.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: A, resSeq: 261,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-804
sad. +0.29
ruf. -0.34
dom. +0.11
bre. -0.37
HIS chainID: A,
resSeq: 286,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 591.0 Å3
d(Fe-oop): 0.041 Å
HIS chainID: A, resSeq: 319,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-806
sad. +0.35
ruf. -1.05
dom. -0.13
bre. -0.37
HIS chainID: A,
resSeq: 500,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 434.0 Å3
d(Fe-oop): 0.041 Å
HIS chainID: A, resSeq: 564,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-807
sad. -0.08
ruf. -0.42
dom. -0.05
bre. -0.43
HIS chainID: A,
resSeq: 507,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 465.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: A, resSeq: 542,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-808
sad. +0.24
ruf. +0.01
dom. -0.00
bre. -0.40
HIS chainID: A,
resSeq: 561,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 429.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: A, resSeq: 580,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-809
sad. +0.08
ruf. -0.09
dom. +0.05
bre. -0.39
HIS chainID: A,
resSeq: 618,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 620.0 Å3
d(Fe-oop): 0.021 Å
HIS chainID: A, resSeq: 666,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbz-A-810
sad. +0.15
ruf. -0.68
dom. -0.14
bre. -0.40
HIS chainID: A,
resSeq: 627,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 501.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: A, resSeq: 659,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC