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PyDISH No: 17694

PDB: 8qbq,
chainID: A, resSeq: 724
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.81 Å

axial ligand #1: HIS

chainID: A,
resSeq: 297,
Coordination distance[Å]: 2.209
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
Organism: Shewanella oneidensis MR-1

axial ligand #2: HIS

chainID: A,
resSeq: 310,
Coordination distance[Å]: 1.891
molecule: same as ligand #1

List of other hemes in pdb:8qbq

ID of heme Distortion Axial ligands on heme Function & structure
8qbq-A-720
sad. -0.33
ruf. -0.44
dom. +0.10
bre. -0.16
HIS chainID: A,
resSeq: 190,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 460.0 Å3
d(Fe-oop): 0.087 Å
HIS chainID: A, resSeq: 233,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-721
sad. +0.24
ruf. -0.01
dom. -0.03
bre. -0.16
HIS chainID: A,
resSeq: 198,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 439.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: A, resSeq: 210,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-722
sad. -0.19
ruf. -0.24
dom. +0.04
bre. -0.22
HIS chainID: A,
resSeq: 230,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 420.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: A, resSeq: 261,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-723
sad. +0.51
ruf. -0.15
dom. +0.20
bre. -0.22
HIS chainID: A,
resSeq: 286,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 573.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: A, resSeq: 319,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-725
sad. +0.56
ruf. -0.58
dom. +0.02
bre. -0.16
HIS chainID: A,
resSeq: 500,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 486.0 Å3
d(Fe-oop): 0.099 Å
HIS chainID: A, resSeq: 564,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-726
sad. -0.12
ruf. -0.21
dom. -0.00
bre. -0.23
HIS chainID: A,
resSeq: 507,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 455.0 Å3
d(Fe-oop): 0.026 Å
HIS chainID: A, resSeq: 542,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-727
sad. +0.31
ruf. -0.00
dom. -0.01
bre. -0.19
HIS chainID: A,
resSeq: 561,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 437.0 Å3
d(Fe-oop): 0.018 Å
HIS chainID: A, resSeq: 580,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-728
sad. +0.12
ruf. +0.02
dom. +0.09
bre. -0.20
HIS chainID: A,
resSeq: 618,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 611.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: A, resSeq: 666,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
8qbq-A-729
sad. +0.30
ruf. -0.40
dom. -0.01
bre. -0.22
HIS chainID: A,
resSeq: 627,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC
electron transporter
oligomeric count: 1
pocket vol.: 508.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: A, resSeq: 659,
molecule: Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC