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PyDISH No: 17649

PDB: 8pw7,
chainID: D, resSeq: 301
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 3.5 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 2.128
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 7.1.1.8
Organism: Mus musculus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.036
molecule: same as ligand #1

List of other hemes in pdb:8pw7

ID of heme Distortion Axial ligands on heme Function & structure
8pw7-n-603
sad. -0.00
ruf. +0.00
dom. +0.00
bre. -0.00
HIS chainID: n,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 704.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: n, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8pw7-n-604
sad. +0.01
ruf. -0.00
dom. -0.00
bre. -0.00
HIS chainID: n,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 711.0 Å3
d(Fe-oop): 0.004 Å
Not assigned.
8pw7-C-401
sad. -0.19
ruf. +0.33
dom. +0.04
bre. -0.14
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 407.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
8pw7-C-402
sad. -0.74
ruf. -0.81
dom. +0.19
bre. -0.05
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 413.0 Å3
d(Fe-oop): 0.038 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
8pw7-N-402
sad. -0.23
ruf. +0.29
dom. +0.09
bre. -0.11
HIS chainID: N,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 410.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: N, resSeq: 182,
molecule: Cytochrome b
8pw7-N-403
sad. -0.88
ruf. -0.92
dom. +0.22
bre. -0.01
HIS chainID: N,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 401.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: N, resSeq: 196,
molecule: Cytochrome b
8pw7-O-303
sad. -0.06
ruf. -0.25
dom. +0.01
bre. -0.16
HIS chainID: O,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 79
pocket vol.: 413.0 Å3
d(Fe-oop): 0.021 Å
MET chainID: O, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial