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PyDISH No: 17642

PDB: 8pw6,
chainID: O, resSeq: 301
heme type: C

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 3.3 Å

axial ligand #1: HIS

chainID: O,
resSeq: 41,
Coordination distance[Å]: 1.866
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 7.1.1.8
Organism: Mus musculus

axial ligand #2: MET

chainID: O,
resSeq: 160,
Coordination distance[Å]: 2.173
molecule: same as ligand #1

List of other hemes in pdb:8pw6

ID of heme Distortion Axial ligands on heme Function & structure
8pw6-C-401
sad. -0.22
ruf. +0.43
dom. -0.03
bre. -0.13
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 424.0 Å3
d(Fe-oop): 0.059 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
8pw6-C-402
sad. -0.79
ruf. -0.83
dom. +0.21
bre. -0.02
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 387.0 Å3
d(Fe-oop): 0.030 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
8pw6-D-301
sad. +0.00
ruf. +0.01
dom. -0.10
bre. -0.19
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 79
pocket vol.: 410.0 Å3
d(Fe-oop): 0.082 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
8pw6-N-402
sad. -0.12
ruf. +0.30
dom. -0.10
bre. -0.15
HIS chainID: N,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 408.0 Å3
d(Fe-oop): 0.047 Å
HIS chainID: N, resSeq: 182,
molecule: Cytochrome b
8pw6-N-403
sad. -0.85
ruf. -0.89
dom. +0.22
bre. +0.01
HIS chainID: N,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 79
pocket vol.: 404.0 Å3
d(Fe-oop): 0.035 Å
HIS chainID: N, resSeq: 196,
molecule: Cytochrome b
8pw6-n-603
sad. -0.00
ruf. +0.00
dom. -0.00
bre. +0.01
HIS chainID: n,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 639.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: n, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8pw6-n-604
sad. +0.00
ruf. +0.00
dom. +0.01
bre. +0.00
HIS chainID: n,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 79
pocket vol.: 713.0 Å3
d(Fe-oop): 0.006 Å
Not assigned.