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PyDISH No: 17636

PDB: 8pw5,
chainID: n, resSeq: 603
heme type: A

distortion

Protein data

function: translocase
experiment: ELECTRON MICROSCOPY
resolution: 3.6 Å

axial ligand #1: HIS

chainID: n,
resSeq: 61,
Coordination distance[Å]: 2.219
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Mus musculus

axial ligand #2: HIS

chainID: n,
resSeq: 378,
Coordination distance[Å]: 1.951
molecule: same as ligand #1

List of other hemes in pdb:8pw5

ID of heme	Distortion	Axial ligands on heme		Function & structure
8pw5-C-401	`sad. -0.31 ruf. +0.36 dom. -0.14 bre. -0.07`	HIS	chainID: C, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 92 pocket vol.: 403.0 Å³ d(Fe-oop): 0.012 Å
8pw5-C-401	`sad. -0.31 ruf. +0.36 dom. -0.14 bre. -0.07`	HIS	chainID: C, resSeq: 182, molecule: Cytochrome b
8pw5-C-402	`sad. -0.65 ruf. -0.94 dom. +0.36 bre. +0.00`	HIS	chainID: C, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 92 pocket vol.: 391.0 Å³ d(Fe-oop): 0.036 Å
8pw5-C-402	`sad. -0.65 ruf. -0.94 dom. +0.36 bre. +0.00`	HIS	chainID: C, resSeq: 196, molecule: Cytochrome b
8pw5-D-301	`sad. -0.04 ruf. +0.02 dom. -0.14 bre. -0.17`	HIS	chainID: D, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 92 pocket vol.: 445.0 Å³ d(Fe-oop): 0.073 Å
8pw5-D-301	`sad. -0.04 ruf. +0.02 dom. -0.14 bre. -0.17`	MET	chainID: D, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
8pw5-N-401	`sad. -0.20 ruf. +0.10 dom. -0.05 bre. -0.05`	HIS	chainID: N, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 92 pocket vol.: 401.0 Å³ d(Fe-oop): 0.040 Å
8pw5-N-401	`sad. -0.20 ruf. +0.10 dom. -0.05 bre. -0.05`	HIS	chainID: N, resSeq: 182, molecule: Cytochrome b
8pw5-N-402	`sad. -0.68 ruf. -0.79 dom. +0.29 bre. -0.04`	HIS	chainID: N, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 92 pocket vol.: 416.0 Å³ d(Fe-oop): 0.042 Å
8pw5-N-402	`sad. -0.68 ruf. -0.79 dom. +0.29 bre. -0.04`	HIS	chainID: N, resSeq: 196, molecule: Cytochrome b
8pw5-O-303	`sad. -0.15 ruf. +0.09 dom. +0.01 bre. -0.16`	HIS	chainID: O, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 92 pocket vol.: 395.0 Å³ d(Fe-oop): 0.181 Å
8pw5-O-303	`sad. -0.15 ruf. +0.09 dom. +0.01 bre. -0.16`	MET	chainID: O, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
8pw5-n-604	`sad. +0.01 ruf. +0.00 dom. -0.00 bre. +0.03`	HIS	chainID: n, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 92 pocket vol.: 705.0 Å³ d(Fe-oop): 0.006 Å
8pw5-n-604	`sad. +0.01 ruf. +0.00 dom. -0.00 bre. +0.03`	Not assigned.
8pw5-a-603	`sad. -0.01 ruf. -0.00 dom. -0.00 bre. +0.01`	HIS	chainID: a, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 92 pocket vol.: 731.0 Å³ d(Fe-oop): 0.000 Å
8pw5-a-603	`sad. -0.01 ruf. -0.00 dom. -0.00 bre. +0.01`	HIS	chainID: a, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
8pw5-a-604	`sad. +0.01 ruf. -0.00 dom. -0.00 bre. +0.01`	HIS	chainID: a, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	translocase oligomeric count: 92 pocket vol.: 694.0 Å³ d(Fe-oop): 0.007 Å
8pw5-a-604	`sad. +0.01 ruf. -0.00 dom. -0.00 bre. +0.01`	Not assigned.