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PyDISH No: 17627

PDB: 8pw5,
chainID: C, resSeq: 401
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.6 Å

axial ligand #1: HIS

chainID: C,
resSeq: 83,
Coordination distance[Å]: 2.031
molecule: Cytochrome b
Organism: Mus musculus

axial ligand #2: HIS

chainID: C,
resSeq: 182,
Coordination distance[Å]: 2.034
molecule: same as ligand #1

List of other hemes in pdb:8pw5

ID of heme Distortion Axial ligands on heme Function & structure
8pw5-C-402
sad. -0.65
ruf. -0.94
dom. +0.36
bre. +0.00
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 92
pocket vol.: 391.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
8pw5-D-301
sad. -0.04
ruf. +0.02
dom. -0.14
bre. -0.17
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 92
pocket vol.: 445.0 Å3
d(Fe-oop): 0.073 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
8pw5-N-401
sad. -0.20
ruf. +0.10
dom. -0.05
bre. -0.05
HIS chainID: N,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 92
pocket vol.: 401.0 Å3
d(Fe-oop): 0.040 Å
HIS chainID: N, resSeq: 182,
molecule: Cytochrome b
8pw5-N-402
sad. -0.68
ruf. -0.79
dom. +0.29
bre. -0.04
HIS chainID: N,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 92
pocket vol.: 416.0 Å3
d(Fe-oop): 0.042 Å
HIS chainID: N, resSeq: 196,
molecule: Cytochrome b
8pw5-O-303
sad. -0.15
ruf. +0.09
dom. +0.01
bre. -0.16
HIS chainID: O,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 92
pocket vol.: 395.0 Å3
d(Fe-oop): 0.181 Å
MET chainID: O, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
8pw5-n-603
sad. -0.01
ruf. +0.00
dom. -0.00
bre. +0.03
HIS chainID: n,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 92
pocket vol.: 645.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: n, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8pw5-n-604
sad. +0.01
ruf. +0.00
dom. -0.00
bre. +0.03
HIS chainID: n,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 92
pocket vol.: 705.0 Å3
d(Fe-oop): 0.006 Å
Not assigned.
8pw5-a-603
sad. -0.01
ruf. -0.00
dom. -0.00
bre. +0.01
HIS chainID: a,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 92
pocket vol.: 731.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: a, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
8pw5-a-604
sad. +0.01
ruf. -0.00
dom. -0.00
bre. +0.01
HIS chainID: a,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
translocase
oligomeric count: 92
pocket vol.: 694.0 Å3
d(Fe-oop): 0.007 Å
Not assigned.