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Protein data
function: translocaseexperiment: ELECTRON MICROSCOPY
resolution: 2.8 Å
axial ligand #1: HIS
chainID: L,resSeq: 86,
Coordination distance[Å]: 2.536
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Mycolicibacterium smegmatis
axial ligand #2: HIS
chainID: L,resSeq: 399,
Coordination distance[Å]: 2.085
molecule: same as ligand #1
List of other hemes in pdb:8ovc
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
8ovc-O-301 |
sad. +0.04 ruf. -0.44 dom. -0.47 bre. -0.06 |
HIS | chainID: O, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 467.0 Å3 d(Fe-oop): 0.182 Å |
| MET | chainID: O, resSeq: 122, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
8ovc-O-302 |
sad. +0.05 ruf. -1.05 dom. +0.26 bre. +0.02 |
HIS | chainID: O, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 399.0 Å3 d(Fe-oop): 0.105 Å |
| MET | chainID: O, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
8ovc-N-602 |
sad. -0.05 ruf. +0.22 dom. +0.24 bre. +0.01 |
HIS | chainID: N, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 453.0 Å3 d(Fe-oop): 0.093 Å |
| HIS | chainID: N, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
8ovc-N-607 |
sad. -1.11 ruf. -0.29 dom. +0.27 bre. +0.30 |
HIS | chainID: N, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 443.0 Å3 d(Fe-oop): 0.151 Å |
| HIS | chainID: N, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
8ovc-R-602 |
sad. -0.35 ruf. +0.10 dom. -0.04 bre. -0.48 |
Not assigned. | unclassified oligomeric count: 28 pocket vol.: 840.0 Å3 d(Fe-oop): 0.181 Å |
|
| Not assigned. | ||||
8ovc-R-603 |
sad. -0.58 ruf. +0.57 dom. +0.24 bre. -0.43 |
HIS | chainID: R, resSeq: 86, molecule: Cytochrome c oxidase subunit 1 |
translocase oligomeric count: 28 pocket vol.: 794.0 Å3 d(Fe-oop): 0.133 Å |
| HIS | chainID: R, resSeq: 399, molecule: Cytochrome c oxidase subunit 1 |
|||
8ovc-C-301 |
sad. +0.04 ruf. -0.44 dom. -0.47 bre. -0.06 |
HIS | chainID: C, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 441.0 Å3 d(Fe-oop): 0.182 Å |
| MET | chainID: C, resSeq: 122, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
8ovc-C-302 |
sad. +0.05 ruf. -1.05 dom. +0.26 bre. +0.02 |
HIS | chainID: C, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit |
translocase oligomeric count: 28 pocket vol.: 419.0 Å3 d(Fe-oop): 0.106 Å |
| MET | chainID: C, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
8ovc-H-603 |
sad. +0.08 ruf. -1.26 dom. -0.08 bre. +0.12 |
HIS | chainID: H, resSeq: 109, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 453.0 Å3 d(Fe-oop): 0.002 Å |
| HIS | chainID: H, resSeq: 211, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
8ovc-H-610 |
sad. -1.12 ruf. -0.51 dom. +0.10 bre. +0.32 |
HIS | chainID: H, resSeq: 123, molecule: Cytochrome bc1 complex cytochrome b subunit |
translocase oligomeric count: 28 pocket vol.: 453.0 Å3 d(Fe-oop): 0.227 Å |
| HIS | chainID: H, resSeq: 226, molecule: Cytochrome bc1 complex cytochrome b subunit |
|||
8ovc-L-602 |
sad. -0.35 ruf. +0.10 dom. -0.04 bre. -0.48 |
Not assigned. | unclassified oligomeric count: 28 pocket vol.: 869.0 Å3 d(Fe-oop): 0.181 Å |
|
| Not assigned. | ||||