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PyDISH No: 17554

PDB: 8k9e,
chainID: A, resSeq: 303
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.33 Å

axial ligand #1: HIS

chainID: A,
resSeq: 130,
Coordination distance[Å]: 2.005
molecule: Cytochrome c7-like domain-containing protein
Organism: Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)

axial ligand #2: HIS

chainID: A,
resSeq: 144,
Coordination distance[Å]: 1.863
molecule: same as ligand #1

List of other hemes in pdb:8k9e

ID of heme Distortion Axial ligands on heme Function & structure
8k9e-A-301
sad. -0.31
ruf. -0.09
dom. +0.19
bre. +0.25
MET chainID: A,
resSeq: 161,
molecule: Cytochrome c7-like domain-containing protein
electron transporter
oligomeric count: 8
pocket vol.: 379.0 Å3
d(Fe-oop): 0.023 Å
HIS chainID: A, resSeq: 218,
molecule: Cytochrome c7-like domain-containing protein
8k9e-A-302
sad. -0.07
ruf. +0.35
dom. +0.01
bre. +0.23
HIS chainID: A,
resSeq: 133,
molecule: Cytochrome c7-like domain-containing protein
electron transporter
oligomeric count: 8
pocket vol.: 371.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: A, resSeq: 168,
molecule: Cytochrome c7-like domain-containing protein
8k9e-A-304
sad. -0.06
ruf. -0.83
dom. +0.33
bre. +0.29
HIS chainID: A,
resSeq: 55,
molecule: Cytochrome c7-like domain-containing protein
electron transporter
oligomeric count: 8
pocket vol.: 413.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: A, resSeq: 70,
molecule: Cytochrome c7-like domain-containing protein
8k9e-A-305
sad. -0.06
ruf. -0.23
dom. +0.08
bre. +0.23
HIS chainID: A,
resSeq: 58,
molecule: Cytochrome c7-like domain-containing protein
electron transporter
oligomeric count: 8
pocket vol.: 455.0 Å3
d(Fe-oop): 0.015 Å
HIS chainID: A, resSeq: 91,
molecule: Cytochrome c7-like domain-containing protein
8k9e-E-301
sad. +0.05
ruf. +0.03
dom. +0.03
bre. +0.24
HIS chainID: E,
resSeq: 107,
molecule: Cytochrome c domain-containing protein
electron transporter
oligomeric count: 8
pocket vol.: 420.0 Å3
d(Fe-oop): 0.010 Å
MET chainID: E, resSeq: 162,
molecule: Cytochrome c domain-containing protein