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PyDISH No: 17540

PDB: 8k5o,
chainID: C, resSeq: 401
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.42 Å

axial ligand #1: LYS

chainID: C,
resSeq: 96,
Coordination distance[Å]: 2.149
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Halorhodospira halochloris

axial ligand #2: HIS

chainID: C,
resSeq: 113,
Coordination distance[Å]: 2.045
molecule: same as ligand #1

List of other hemes in pdb:8k5o

ID of heme Distortion Axial ligands on heme Function & structure
8k5o-C-402
sad. +0.07
ruf. -0.45
dom. -0.11
bre. +0.03
MET chainID: C,
resSeq: 131,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 56
pocket vol.: 243.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: C, resSeq: 161,
molecule: Photosynthetic reaction center cytochrome c subunit
8k5o-C-403
sad. +0.43
ruf. -0.10
dom. -0.09
bre. +0.03
MET chainID: C,
resSeq: 250,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 56
pocket vol.: 288.0 Å3
d(Fe-oop): 0.083 Å
HIS chainID: C, resSeq: 265,
molecule: Photosynthetic reaction center cytochrome c subunit
8k5o-C-404
sad. +0.10
ruf. -0.65
dom. +0.00
bre. +0.06
HIS chainID: C,
resSeq: 146,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 56
pocket vol.: 277.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: C, resSeq: 327,
molecule: Photosynthetic reaction center cytochrome c subunit