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PyDISH No: 17483

PDB: 8jax,
chainID: U, resSeq: 202
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 3.27 Å

axial ligand #1: MET

chainID: T,
resSeq: 52,
Coordination distance[Å]: 3.015
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Streptomyces coelicolor

axial ligand #2: MET

chainID: U,
resSeq: 52,
Coordination distance[Å]: 2.027
molecule: Bacterioferritin
EC number: 1.16.3.1
Organism: Streptomyces coelicolor

List of other hemes in pdb:8jax

ID of heme Distortion Axial ligands on heme Function & structure
8jax-B-201
sad. -0.47
ruf. -0.91
dom. -0.76
bre. -0.00
MET chainID: A,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 682.0 Å3
d(Fe-oop): 0.242 Å
MET chainID: B, resSeq: 52,
molecule: Bacterioferritin
8jax-D-201
sad. -0.54
ruf. +0.53
dom. +0.20
bre. +0.05
MET chainID: C,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 673.0 Å3
d(Fe-oop): 0.150 Å
MET chainID: D, resSeq: 52,
molecule: Bacterioferritin
8jax-F-202
sad. +0.02
ruf. -0.79
dom. -0.98
bre. +0.07
MET chainID: F,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 618.0 Å3
d(Fe-oop): 0.152 Å
MET chainID: E, resSeq: 52,
molecule: Bacterioferritin
8jax-H-202
sad. -0.38
ruf. -0.62
dom. -0.83
bre. +0.30
MET chainID: H,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 636.0 Å3
d(Fe-oop): 0.429 Å
MET chainID: N, resSeq: 52,
molecule: Bacterioferritin
8jax-K-201
sad. -0.57
ruf. +0.30
dom. +1.55
bre. +0.30
MET chainID: J,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 715.0 Å3
d(Fe-oop): 0.315 Å
MET chainID: K, resSeq: 52,
molecule: Bacterioferritin
8jax-M-202
sad. -0.79
ruf. -1.09
dom. -0.45
bre. +0.12
MET chainID: L,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 630.0 Å3
d(Fe-oop): 0.264 Å
MET chainID: M, resSeq: 52,
molecule: Bacterioferritin
8jax-P-202
sad. -0.50
ruf. -0.58
dom. -0.32
bre. -0.06
MET chainID: O,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 704.0 Å3
d(Fe-oop): 0.173 Å
Not assigned.
8jax-R-201
sad. -0.41
ruf. +0.02
dom. -1.30
bre. -0.04
MET chainID: Q,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 679.0 Å3
d(Fe-oop): 0.461 Å
MET chainID: R, resSeq: 52,
molecule: Bacterioferritin
8jax-S-202
sad. +0.23
ruf. +0.09
dom. -0.62
bre. +0.16
MET chainID: I,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 592.0 Å3
d(Fe-oop): 0.098 Å
MET chainID: S, resSeq: 52,
molecule: Bacterioferritin
8jax-V-202
sad. -0.40
ruf. -0.64
dom. -1.00
bre. -0.03
MET chainID: V,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 651.0 Å3
d(Fe-oop): 0.455 Å
MET chainID: W, resSeq: 52,
molecule: Bacterioferritin
8jax-X-201
sad. -0.12
ruf. +1.36
dom. +0.92
bre. +0.19
MET chainID: G,
resSeq: 52,
molecule: Bacterioferritin
oxidoreductase
oligomeric count: 24
pocket vol.: 651.0 Å3
d(Fe-oop): 0.222 Å
MET chainID: X, resSeq: 52,
molecule: Bacterioferritin