Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 17457

PDB: 8js6,
chainID: C, resSeq: 601
heme type: B

distortion

Protein data

function: transferase
experiment: X-RAY DIFFRACTION
resolution: 2.7 Å

axial ligand #1: HIS

chainID: C,
resSeq: 200,
Coordination distance[Å]: 2.029
molecule: Sensor protein FixL
EC number: 2.7.13.3
Organism: Bradyrhizobium diazoefficiens USDA 110

axial ligand #2: CYN

chainID: C,
resSeq: 602,
Coordination distance[Å]: 1.986
molecule: CYANIDE ION

List of other hemes in pdb:8js6

ID of heme	Distortion	Axial ligands on heme		Function & structure
8js6-A-601	`sad. +0.63 ruf. +0.29 dom. -0.20 bre. -0.12`	HIS	chainID: A, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 490.0 Å³ d(Fe-oop): 0.094 Å
8js6-A-601	`sad. +0.63 ruf. +0.29 dom. -0.20 bre. -0.12`	CYN	chainID: A, resSeq: 602, molecule: CYANIDE ION
8js6-B-302	`sad. +0.55 ruf. +0.30 dom. -0.33 bre. -0.16`	HIS	chainID: B, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 496.0 Å³ d(Fe-oop): 0.059 Å
8js6-B-302	`sad. +0.55 ruf. +0.30 dom. -0.33 bre. -0.16`	CYN	chainID: B, resSeq: 303, molecule: CYANIDE ION
8js6-D-303	`sad. +0.67 ruf. +0.15 dom. -0.05 bre. -0.13`	HIS	chainID: D, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 487.0 Å³ d(Fe-oop): 0.087 Å
8js6-D-303	`sad. +0.67 ruf. +0.15 dom. -0.05 bre. -0.13`	CYN	chainID: D, resSeq: 304, molecule: CYANIDE ION
8js6-E-601	`sad. +0.52 ruf. +0.16 dom. -0.33 bre. -0.20`	HIS	chainID: E, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 424.0 Å³ d(Fe-oop): 0.060 Å
8js6-E-601	`sad. +0.52 ruf. +0.16 dom. -0.33 bre. -0.20`	CYN	chainID: E, resSeq: 602, molecule: CYANIDE ION
8js6-F-302	`sad. +0.37 ruf. -0.03 dom. -0.24 bre. -0.16`	HIS	chainID: F, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 514.0 Å³ d(Fe-oop): 0.088 Å
8js6-F-302	`sad. +0.37 ruf. -0.03 dom. -0.24 bre. -0.16`	CYN	chainID: F, resSeq: 303, molecule: CYANIDE ION
8js6-G-601	`sad. +0.48 ruf. +0.29 dom. -0.21 bre. -0.17`	HIS	chainID: G, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 480.0 Å³ d(Fe-oop): 0.010 Å
8js6-G-601	`sad. +0.48 ruf. +0.29 dom. -0.21 bre. -0.17`	CYN	chainID: G, resSeq: 602, molecule: CYANIDE ION
8js6-H-302	`sad. +0.48 ruf. +0.11 dom. -0.28 bre. -0.05`	HIS	chainID: H, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 445.0 Å³ d(Fe-oop): 0.048 Å
8js6-H-302	`sad. +0.48 ruf. +0.11 dom. -0.28 bre. -0.05`	CYN	chainID: H, resSeq: 303, molecule: CYANIDE ION
8js6-I-601	`sad. +0.55 ruf. +0.49 dom. -0.43 bre. -0.12`	HIS	chainID: I, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 486.0 Å³ d(Fe-oop): 0.012 Å
8js6-I-601	`sad. +0.55 ruf. +0.49 dom. -0.43 bre. -0.12`	CYN	chainID: I, resSeq: 602, molecule: CYANIDE ION
8js6-J-303	`sad. +0.33 ruf. +0.57 dom. -0.16 bre. -0.08`	HIS	chainID: J, resSeq: 200, molecule: Sensor protein FixL	transferase oligomeric count: 2 pocket vol.: 526.0 Å³ d(Fe-oop): 0.093 Å
8js6-J-303	`sad. +0.33 ruf. +0.57 dom. -0.16 bre. -0.08`	CYN	chainID: J, resSeq: 304, molecule: CYANIDE ION