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PyDISH No: 17417

PDB: 8irh,
chainID: v, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.25 Å

axial ligand #1: HIS

chainID: v,
resSeq: 41,
Coordination distance[Å]: 2.084
molecule: Cytochrome c-550
Organism: Thermostichus vulcanus

axial ligand #2: HIS

chainID: v,
resSeq: 92,
Coordination distance[Å]: 2.088
molecule: same as ligand #1

List of other hemes in pdb:8irh

ID of heme Distortion Axial ligands on heme Function & structure
8irh-F-102
sad. +0.79
ruf. -0.30
dom. +0.06
bre. -0.04
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 39
pocket vol.: 473.0 Å3
d(Fe-oop): 0.077 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
8irh-V-201
sad. +0.32
ruf. -0.36
dom. +0.12
bre. -0.21
HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 39
pocket vol.: 442.0 Å3
d(Fe-oop): 0.039 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
8irh-e-101
sad. +0.69
ruf. -0.21
dom. +0.18
bre. -0.04
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 39
pocket vol.: 489.0 Å3
d(Fe-oop): 0.106 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta