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PyDISH No: 17339

PDB: 8ibg,
chainID: Ac, resSeq: 401
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 3.8 Å

axial ligand #1: HIS

chainID: Ac,
resSeq: 83,
Coordination distance[Å]: 2.033
molecule: Cytochrome b
Organism: Mus musculus

axial ligand #2: HIS

chainID: Ac,
resSeq: 182,
Coordination distance[Å]: 2.075
molecule: same as ligand #1

List of other hemes in pdb:8ibg

ID of heme Distortion Axial ligands on heme Function & structure
8ibg-AC-401
sad. -0.01
ruf. +0.36
dom. -0.02
bre. +0.01
HIS chainID: AC,
resSeq: 83,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 370.0 Å3
d(Fe-oop): 0.079 Å
HIS chainID: AC, resSeq: 182,
molecule: Cytochrome b
8ibg-AC-402
sad. -0.17
ruf. +0.09
dom. +0.09
bre. +0.05
HIS chainID: AC,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 428.0 Å3
d(Fe-oop): 0.062 Å
HIS chainID: AC, resSeq: 196,
molecule: Cytochrome b
8ibg-AD-401
sad. +0.04
ruf. +0.25
dom. +0.09
bre. -0.62
HIS chainID: AD,
resSeq: 125,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 466.0 Å3
d(Fe-oop): 0.029 Å
MET chainID: AD, resSeq: 244,
molecule: Cytochrome c1, heme protein, mitochondrial
8ibg-Ac-402
sad. -0.13
ruf. -0.11
dom. +0.05
bre. +0.01
HIS chainID: Ac,
resSeq: 97,
molecule: Cytochrome b
electron transporter
oligomeric count: 22
pocket vol.: 426.0 Å3
d(Fe-oop): 0.055 Å
HIS chainID: Ac, resSeq: 196,
molecule: Cytochrome b
8ibg-Ad-401
sad. +0.05
ruf. -0.02
dom. -0.08
bre. -0.19
HIS chainID: Ad,
resSeq: 125,
molecule: Cytochrome c1, heme protein, mitochondrial
translocase
oligomeric count: 22
pocket vol.: 453.0 Å3
d(Fe-oop): 0.053 Å
MET chainID: Ad, resSeq: 244,
molecule: Cytochrome c1, heme protein, mitochondrial